geoo95

Pinned Repositories

circlize
Circular visualization in R
Language:R00
DCC
DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate sets to arrive at a precise list of circRNA candidates.
Language:Python00
fgbio
Tools for working with genomic and high throughput sequencing data.
Language:Scala00
KNIFE
Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms
Language:Python00
UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
Language:Python00
umitools
Tools to handle reads sequenced with unique molecular identifiers (UMIs).
Language:Python00

geoo95's Repositories

geoo95/fgbio
Tools for working with genomic and high throughput sequencing data.
geoo95/UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
geoo95/circlize
Circular visualization in R
Language:R
geoo95/DCC
DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate sets to arrive at a precise list of circRNA candidates.
Language:Python
geoo95/KNIFE
Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms
Language:Python
geoo95/umitools
Tools to handle reads sequenced with unique molecular identifiers (UMIs).