Pinned Repositories
circlize
Circular visualization in R
DCC
DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate sets to arrive at a precise list of circRNA candidates.
fgbio
Tools for working with genomic and high throughput sequencing data.
KNIFE
Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms
UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
umitools
Tools to handle reads sequenced with unique molecular identifiers (UMIs).
geoo95's Repositories
geoo95/fgbio
Tools for working with genomic and high throughput sequencing data.
geoo95/UMI-tools
Tools for handling Unique Molecular Identifiers in NGS data sets
geoo95/circlize
Circular visualization in R
geoo95/DCC
DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate sets to arrive at a precise list of circRNA candidates.
geoo95/KNIFE
Known and Novel IsoForm Explorer. Statistically based splicing detection for circular and linear isoforms
geoo95/umitools
Tools to handle reads sequenced with unique molecular identifiers (UMIs).