Pinned Repositories
BioC2015OpenCyto
BioC 2015 OpenCyto workshop R package
containerit
Package an R workspace and all dependencies as a Docker container
OpenCytoTutorial
A tutorial on installing and using OpenCyto
Talks
HTML slides for various talks.
COMPASS
Combinatorial Polyfunctionality Analysis of Single Cells
flowCore
Core flow cytometry infrastructure
flowWorkspace
flowWorkspace
MAST
Tools and methods for analysis of single cell assay data in R
openCyto
A package that provides data analysis pipeline for flow cytometry.
DataPackageR
An R package to enable reproducible data processing, packaging and sharing.
gfinak's Repositories
gfinak/OpenCytoTutorial
A tutorial on installing and using OpenCyto
gfinak/Talks
HTML slides for various talks.
gfinak/BioC2015OpenCyto
BioC 2015 OpenCyto workshop R package
gfinak/containerit
Package an R workspace and all dependencies as a Docker container
gfinak/Cytotrol
gfinak/faust_nextflow
gfinak/MIMOSA_manuscript
The MIMSA manuscript with reproducible code.
gfinak/TidyCars
A data package demonstrating the use of rOpenSci/DataPackageR
gfinak/abstar
VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
gfinak/courses
Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1
gfinak/Cytometry_PreGating
gfinak/cytoRSuite
Compensation, Gating & Visualisation Toolkit for Analysis of Flow Cytometry Data
gfinak/flowClean
gfinak/FOCISMeeting
gfinak/GFMisc
Doesn't everyone have a 'Misc' package these days?
gfinak/hexSticker
:sparkles:Hexagon sticker in R
gfinak/hugo-academic
The website designer for Hugo. Build and deploy a beautiful website in minutes :rocket:
gfinak/improvedMindensity
R routine to perform 1D gating of flow cytometry data
gfinak/LyoplateStandardizationCyto2014
Presentation on the Lyoplate Gating Standardization Project
gfinak/maker
Makefile for R packages
gfinak/Multicore-TSNE
Parallel t-SNE implementation with Python and Torch wrappers.
gfinak/rcpp-gallery
Source code for the Rcpp Gallery website
gfinak/RcppNumerical
Rcpp Integration for Numerical Computing Libraries
gfinak/roweb2
rOpenSci website
gfinak/swift
Access Fred Hutch OpenStack swift object store