_maybe_transform_argument mischaracterizes pandas.DataFrame as transform
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jeffbaumes commented
The check in task.py
incorrectly tries to use a DataFrame as a transform since it has a transform
method.
Resulting stack on calling a simple task function locally:
Traceback (most recent call last):
File "example.py", line 14, in <module>
result = anova(data)
File "/Users/jeff/.virtualenvs/pyscience/lib/python3.6/site-packages/celery/local.py", line 191, in __call__
return self._get_current_object()(*a, **kw)
File "/Users/jeff/.virtualenvs/pyscience/lib/python3.6/site-packages/girder_worker/task.py", line 145, in __call__
_t_args = _walk_obj(args, self._maybe_transform_argument)
File "/Users/jeff/.virtualenvs/pyscience/lib/python3.6/site-packages/girder_worker_utils/__init__.py", line 39, in _walk_obj
return tuple(_walk_obj(list(obj), func, leaf_condition=leaf_condition))
File "/Users/jeff/.virtualenvs/pyscience/lib/python3.6/site-packages/girder_worker_utils/__init__.py", line 36, in _walk_obj
return [_walk_obj(v, func, leaf_condition=leaf_condition) for v in obj]
File "/Users/jeff/.virtualenvs/pyscience/lib/python3.6/site-packages/girder_worker_utils/__init__.py", line 36, in <listcomp>
return [_walk_obj(v, func, leaf_condition=leaf_condition) for v in obj]
File "/Users/jeff/.virtualenvs/pyscience/lib/python3.6/site-packages/girder_worker_utils/__init__.py", line 41, in _walk_obj
return func(obj)
File "/Users/jeff/.virtualenvs/pyscience/lib/python3.6/site-packages/girder_worker/task.py", line 136, in _maybe_transform_argument
return arg.transform(**kwargs)
TypeError: transform() missing 1 required positional argument: 'func'