Pinned Repositories
bkgd
code for estimating the effect of background selection
check_fastq
Utilities for checking the integrity of and repairing fastq files
CHT
Combined Haplotype Test
Dmel
scripts for D. melanogaster chromatin projects
draw_genes
A flexible python program for generating figures from regions of the genome.
genome
Python library and scripts for retrieval and storage of genomics data in HDF5 format
gmcvicker.github.io
website
impute
scripts for converting imputed SNP data to HDF5
MHC
WASP
WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery
gmcvicker's Repositories
gmcvicker/genome
Python library and scripts for retrieval and storage of genomics data in HDF5 format
gmcvicker/draw_genes
A flexible python program for generating figures from regions of the genome.
gmcvicker/check_fastq
Utilities for checking the integrity of and repairing fastq files
gmcvicker/CHT
Combined Haplotype Test
gmcvicker/bkgd
code for estimating the effect of background selection
gmcvicker/Dmel
scripts for D. melanogaster chromatin projects
gmcvicker/MHC
gmcvicker/WASP
WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery
gmcvicker/gmcvicker.github.io
website
gmcvicker/impute
scripts for converting imputed SNP data to HDF5
gmcvicker/mcmapper
tools for unbiased read mapping
gmcvicker/mcvicker-lab-web
McVicker Lab Webpage
gmcvicker/varCA
Use an ensemble of variant callers to call variants in ATAC-seq data
gmcvicker/vcf-util
code for working with VCFs