google-deepmind/alphafold

Downloaded cif file from open access doesn't have secondary structure assignments

jiangandrew opened this issue · 2 comments

jiangandrew commented

Model 0 (fold_2024_05_13_11_18_model_0.cif) appears to be a protein without secondary structure assignments."
KeyError: 'pdbx_description'
File '/Applications/Chimera.app/Contents/Resources/share/chimera/Sequence.py", line 993 in getSequences description = entity[index]['pdbx_description']

e-pettersen commented

This was fixed in Chimera at the end of last week. You have to use a daily build to get the fix.

  • 👍1
jiangandrew commented

It works with the newest daily build. Thank you so much for your help!