hfgolino/EGAnet

Item stability following bootEGA using random intercept

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paperbag2449 commented

Please see attached output. Following bootEGA with riEGA, items 16,17,and 18 come out with 0 permutations in original community on the plot, although they are stable in another community in the raw output. I believe I have only encountered this with riEGA.


Item stability

paperbag2449 commented

P.S. It occurred to me that I also started using "most common" as the consensus method and that it might be behind this rather than riEGA, but using default consensus method still results in this issue.

AlexChristensen commented

See other issue: #114

Closing because it will be resolved in next branch merge from: https://github.com/hfgolino/EGAnet/tree/major-changes

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