hjalmarlr

hjalmarlr's Stars

• danielebruneo/remarkable2-hacks

  A collection of hacks, mods, tools, tips & tricks, specifically focused on the reMarkable 2

  3287

• HenriquesLab/ZeroCostDL4Mic

  ZeroCostDL4Mic: A Google Colab based no-cost toolbox to explore Deep-Learning in Microscopy

  Language:Jupyter Notebook566130

• requarks/wiki

  Wiki.js | A modern and powerful wiki app built on Node.js

  Language:Vue24.9k2.8k

• exoplatform/exo-community

  eXo community ressources and discussions

  351

• broadinstitute/dig-dug-server

  Portal 2.0

  Language:JavaScript4

• broadinstitute/dig-dug-portal

  Language:Vue21

• cytomining/DeepProfiler

  Morphological profiling using deep learning

  Language:Python10740

• broadinstitute/luad-cell-painting

  Repository for analysis of CellPainting data in the LUAD dataset

  Language:Jupyter Notebook74

• nebiolabs/plate-map

  A flexible tool for defining the contents of 96 well plates.

  Language:JavaScript4713

• DistributedScience/Distributed-CellProfiler

  Run encapsulated docker containers with CellProfiler in the Amazon Web Services infrastructure.

  Language:Python4025

• piximi/piximi

  Language:TypeScript314

• piximi/application_archived

  A web application for classifying objects

  Language:TypeScript2912

• vanvalenlab/deepcell-tf

  Deep Learning Library for Single Cell Analysis

  Language:Python42799

• clEsperanto/pyclesperanto_prototype

  GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data

  Language:Jupyter Notebook21546

• chaiNNer-org/chaiNNer

  A node-based image processing GUI aimed at making chaining image processing tasks easy and customizable. Born as an AI upscaling application, chaiNNer has grown into an extremely flexible and powerful programmatic image processing application.

  Language:Python4.7k286

• DeepTrackAI/DeepTrack2

  DeepTrack2

  Language:Python16651

• Jutta-Proto/protocol-cpp

  C++ JURA protocol implementation for controlling a Jura coffee maker over a serial (UART) connection.

  Language:C++646

• MAIF/shapash

  🔅 Shapash: User-friendly Explainability and Interpretability to Develop Reliable and Transparent Machine Learning Models

  Language:Jupyter Notebook2.7k334

• CellProfiler/CellProfiler

  An open-source application for biological image analysis

  Language:Python925378

• ilastik/ilastik

  ilastik-shell, applets, and workflows to string them together.

  Language:Python353131

• xyflow/awesome-node-based-uis

  A curated list with resources about node-based UIs

  2.6k127

• vindelorme/PlateEditor

  Repository for PlateEditor, the web application allowing management of plate layout, results visualization and analysis

  Language:JavaScript201

• CSBDeep/CSBDeep

  Image restoration for fluorescence microscopy

  Language:Python28682

• hadim/docker-omero

  Set of Dockerfile to build a ready-to-use OMERO server

  Language:Shell1515

• knime-mpicbg/HCS-Tools

  HCS-Tools

  Language:Java103

• jaakkopasanen/AutoEq

  Automatic headphone equalization from frequency responses

  Language:Python13.5k2.5k