AttributeError: module 'numpy' has no attribute 'warnings'
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I am following the 3_Interactivity.ipynb example, howerver, I got an error with
hv.output(backend="matplotlib")
agg = ds.Canvas().points(df,'x','y')
hd.datashade(points) + hd.shade(hv.Image(agg)) + hv.RGB(np.array(tf.shade(agg).to_pil()), bounds=(-10,-10,10,10))AttributeError Traceback (most recent call last)
Cell In[27], line 2
1 hv.output(backend="matplotlib")
----> 2 agg = ds.Canvas().points(df,'x','y')
3 hd.datashade(points) + hd.shade(hv.Image(agg)) + hv.RGB(np.array(tf.shade(agg).to_pil()), bounds=(-10,-10,10,10))
File /opt/homebrew/Caskroom/mambaforge/base/envs/datashader/lib/python3.10/site-packages/datashader/core.py:219, in Canvas.points(self, source, x, y, agg, geometry)
212 raise ValueError(
213 "source must be an instance of spatialpandas.GeoDataFrame or \n"
214 "spatialpandas.dask.DaskGeoDataFrame.\n"
215 " Received value of type {typ}".format(typ=type(source)))
217 glyph = MultiPointGeometry(geometry)
--> 219 return bypixel(source, self, glyph, agg)
File /opt/homebrew/Caskroom/mambaforge/base/envs/datashader/lib/python3.10/site-packages/datashader/core.py:1258, in bypixel(source, canvas, glyph, agg, antialias)
1255 canvas.validate()
1257 # All-NaN objects (e.g. chunks of arrays with no data) are valid in Datashader
-> 1258 with np.warnings.catch_warnings():
1259 np.warnings.filterwarnings('ignore', r'All-NaN (slice|axis) encountered')
1260 return bypixel.pipeline(source, schema, canvas, glyph, agg, antialias=antialias)
File /opt/homebrew/Caskroom/mambaforge/base/envs/datashader/lib/python3.10/site-packages/numpy/init.py:320, in getattr(attr)
317 from .testing import Tester
318 return Tester
--> 320 raise AttributeError("module {!r} has no attribute "
321 "{!r}".format(name, attr))
AttributeError: module 'numpy' has no attribute 'warnings'
I use is mac M1, my conda env is,
packages in environment at /opt/homebrew/Caskroom/mambaforge/base/envs/datashader:
Name Version Build Channel
anyio 3.6.2 pyhd8ed1ab_0 conda-forge
appnope 0.1.3 pyhd8ed1ab_0 conda-forge
argon2-cffi 21.3.0 pyhd8ed1ab_0 conda-forge
argon2-cffi-bindings 21.2.0 py310h8e9501a_3 conda-forge
asttokens 2.2.1 pyhd8ed1ab_0 conda-forge
attrs 23.1.0 pyh71513ae_1 conda-forge
backcall 0.2.0 pyh9f0ad1d_0 conda-forge
backports 1.0 pyhd8ed1ab_3 conda-forge
backports.functools_lru_cache 1.6.4 pyhd8ed1ab_0 conda-forge
beautifulsoup4 4.12.2 pyha770c72_0 conda-forge
bleach 6.0.0 pyhd8ed1ab_0 conda-forge
bokeh 3.1.1 pyhd8ed1ab_0 conda-forge
brotli 1.0.9 h1a8c8d9_8 conda-forge
brotli-bin 1.0.9 h1a8c8d9_8 conda-forge
brotlipy 0.7.0 py310h8e9501a_1005 conda-forge
bzip2 1.0.8 h3422bc3_4 conda-forge
ca-certificates 2023.5.7 hf0a4a13_0 conda-forge
certifi 2023.5.7 pyhd8ed1ab_0 conda-forge
cffi 1.15.1 py310h2399d43_3 conda-forge
charset-normalizer 3.1.0 pyhd8ed1ab_0 conda-forge
click 8.1.3 unix_pyhd8ed1ab_2 conda-forge
cloudpickle 2.2.1 pyhd8ed1ab_0 conda-forge
colorama 0.4.6 pyhd8ed1ab_0 conda-forge
colorcet 3.0.1 pyhd8ed1ab_0 conda-forge
comm 0.1.3 pyhd8ed1ab_0 conda-forge
contourpy 1.0.7 py310h2887b22_0 conda-forge
cryptography 40.0.2 py310hfc83b78_0 conda-forge
cycler 0.11.0 pyhd8ed1ab_0 conda-forge
dask-core 2023.5.0 pyhd8ed1ab_0 conda-forge
datashader 0.14.4 pyh1a96a4e_0 conda-forge
datashape 0.5.4 py_1 conda-forge
debugpy 1.6.7 py310h0f1eb42_0 conda-forge
decorator 5.1.1 pyhd8ed1ab_0 conda-forge
defusedxml 0.7.1 pyhd8ed1ab_0 conda-forge
entrypoints 0.4 pyhd8ed1ab_0 conda-forge
executing 1.2.0 pyhd8ed1ab_0 conda-forge
flit-core 3.9.0 pyhd8ed1ab_0 conda-forge
fonttools 4.39.4 py310h2aa6e3c_0 conda-forge
freetype 2.12.1 hd633e50_1 conda-forge
fsspec 2023.5.0 pyh1a96a4e_0 conda-forge
holoviews 1.16.0 py_0 pyviz
idna 3.4 pyhd8ed1ab_0 conda-forge
importlib-metadata 6.6.0 pyha770c72_0 conda-forge
importlib_metadata 6.6.0 hd8ed1ab_0 conda-forge
importlib_resources 5.12.0 pyhd8ed1ab_0 conda-forge
ipykernel 6.23.1 pyh736e0ef_0 conda-forge
ipython 8.13.2 pyhd1c38e8_0 conda-forge
ipython_genutils 0.2.0 py_1 conda-forge
jedi 0.18.2 pyhd8ed1ab_0 conda-forge
jinja2 3.1.2 pyhd8ed1ab_1 conda-forge
jsonschema 4.17.3 pyhd8ed1ab_0 conda-forge
jupyter_client 8.2.0 pyhd8ed1ab_0 conda-forge
jupyter_core 5.3.0 py310hbe9552e_0 conda-forge
jupyter_events 0.6.3 pyhd8ed1ab_0 conda-forge
jupyter_server 2.5.0 pyhd8ed1ab_0 conda-forge
jupyter_server_terminals 0.4.4 pyhd8ed1ab_1 conda-forge
jupyterlab_pygments 0.2.2 pyhd8ed1ab_0 conda-forge
kiwisolver 1.4.4 py310h2887b22_1 conda-forge
lcms2 2.15 hd835a16_1 conda-forge
lerc 4.0.0 h9a09cb3_0 conda-forge
libblas 3.9.0 16_osxarm64_openblas conda-forge
libbrotlicommon 1.0.9 h1a8c8d9_8 conda-forge
libbrotlidec 1.0.9 h1a8c8d9_8 conda-forge
libbrotlienc 1.0.9 h1a8c8d9_8 conda-forge
libcblas 3.9.0 16_osxarm64_openblas conda-forge
libcxx 16.0.4 h4653b0c_0 conda-forge
libdeflate 1.18 h1a8c8d9_0 conda-forge
libexpat 2.5.0 hb7217d7_1 conda-forge
libffi 3.4.2 h3422bc3_5 conda-forge
libgfortran 5.0.0 12_2_0_hd922786_31 conda-forge
libgfortran5 12.2.0 h0eea778_31 conda-forge
libjpeg-turbo 2.1.5.1 h1a8c8d9_0 conda-forge
liblapack 3.9.0 16_osxarm64_openblas conda-forge
libllvm14 14.0.6 hd1a9a77_2 conda-forge
libopenblas 0.3.21 openmp_hc731615_3 conda-forge
libpng 1.6.39 h76d750c_0 conda-forge
libsodium 1.0.18 h27ca646_1 conda-forge
libsqlite 3.42.0 hb31c410_0 conda-forge
libtiff 4.5.0 h4f7d55c_6 conda-forge
libwebp-base 1.3.0 h1a8c8d9_0 conda-forge
libxcb 1.13 h9b22ae9_1004 conda-forge
libzlib 1.2.13 h03a7124_4 conda-forge
linkify-it-py 2.0.0 pyhd8ed1ab_0 conda-forge
llvm-openmp 16.0.4 h1c12783_0 conda-forge
llvmlite 0.40.0 py310h95b248a_0 conda-forge
locket 1.0.0 pyhd8ed1ab_0 conda-forge
markdown 3.4.3 pyhd8ed1ab_0 conda-forge
markdown-it-py 2.2.0 pyhd8ed1ab_0 conda-forge
markupsafe 2.1.2 py310h8e9501a_0 conda-forge
matplotlib 3.7.1 py310hb6292c7_0 conda-forge
matplotlib-base 3.7.1 py310h78c5c2f_0 conda-forge
matplotlib-inline 0.1.6 pyhd8ed1ab_0 conda-forge
mdit-py-plugins 0.3.5 pyhd8ed1ab_0 conda-forge
mdurl 0.1.0 pyhd8ed1ab_0 conda-forge
mistune 2.0.5 pyhd8ed1ab_0 conda-forge
multipledispatch 0.6.0 py_0 conda-forge
munkres 1.1.4 pyh9f0ad1d_0 conda-forge
nbclassic 1.0.0 pyhb4ecaf3_1 conda-forge
nbclient 0.7.4 pyhd8ed1ab_0 conda-forge
nbconvert 7.4.0 pyhd8ed1ab_0 conda-forge
nbconvert-core 7.4.0 pyhd8ed1ab_0 conda-forge
nbconvert-pandoc 7.4.0 pyhd8ed1ab_0 conda-forge
nbformat 5.8.0 pyhd8ed1ab_0 conda-forge
ncurses 6.3 h07bb92c_1 conda-forge
nest-asyncio 1.5.6 pyhd8ed1ab_0 conda-forge
notebook 6.5.4 pyha770c72_0 conda-forge
notebook-shim 0.2.3 pyhd8ed1ab_0 conda-forge
numba 0.57.0 py310hb9b3264_0 conda-forge
numpy 1.24.3 py310haa1e00c_0 conda-forge
openjpeg 2.5.0 hbc2ba62_2 conda-forge
openssl 3.1.0 h53f4e23_3 conda-forge
packaging 23.1 pyhd8ed1ab_0 conda-forge
pandas 2.0.1 py310h1cdf563_1 conda-forge
pandoc 2.19.2 hce30654_2 conda-forge
pandocfilters 1.5.0 pyhd8ed1ab_0 conda-forge
panel 1.0.2 py_0 pyviz
param 1.13.0 pyh1a96a4e_0 conda-forge
parso 0.8.3 pyhd8ed1ab_0 conda-forge
partd 1.4.0 pyhd8ed1ab_0 conda-forge
pexpect 4.8.0 pyh1a96a4e_2 conda-forge
pickleshare 0.7.5 py_1003 conda-forge
pillow 9.5.0 py310h07496d3_0 conda-forge
pip 23.1.2 pyhd8ed1ab_0 conda-forge
pkgutil-resolve-name 1.3.10 pyhd8ed1ab_0 conda-forge
platformdirs 3.5.1 pyhd8ed1ab_0 conda-forge
pooch 1.7.0 pyha770c72_3 conda-forge
prometheus_client 0.16.0 pyhd8ed1ab_0 conda-forge
prompt-toolkit 3.0.38 pyha770c72_0 conda-forge
prompt_toolkit 3.0.38 hd8ed1ab_0 conda-forge
psutil 5.9.5 py310h8e9501a_0 conda-forge
pthread-stubs 0.4 h27ca646_1001 conda-forge
ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge
pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge
pycparser 2.21 pyhd8ed1ab_0 conda-forge
pyct 0.4.6 py_0 conda-forge
pyct-core 0.4.6 py_0 conda-forge
pygments 2.15.1 pyhd8ed1ab_0 conda-forge
pyobjc-core 9.1.1 py310h44ed3dd_0 conda-forge
pyobjc-framework-cocoa 9.1.1 py310h44ed3dd_0 conda-forge
pyopenssl 23.1.1 pyhd8ed1ab_0 conda-forge
pyparsing 3.0.9 pyhd8ed1ab_0 conda-forge
pyrsistent 0.19.3 py310h8e9501a_0 conda-forge
pysocks 1.7.1 pyha2e5f31_6 conda-forge
python 3.10.11 h3ba56d0_0_cpython conda-forge
python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge
python-fastjsonschema 2.16.3 pyhd8ed1ab_0 conda-forge
python-json-logger 2.0.7 pyhd8ed1ab_0 conda-forge
python-tzdata 2023.3 pyhd8ed1ab_0 conda-forge
python_abi 3.10 3_cp310 conda-forge
pytz 2023.3 pyhd8ed1ab_0 conda-forge
pyviz_comms 2.2.1 py_0 pyviz
pyyaml 6.0 py310h8e9501a_5 conda-forge
pyzmq 25.0.2 py310hc407298_0 conda-forge
readline 8.2 h92ec313_1 conda-forge
requests 2.29.0 pyhd8ed1ab_0 conda-forge
rfc3339-validator 0.1.4 pyhd8ed1ab_0 conda-forge
rfc3986-validator 0.1.1 pyh9f0ad1d_0 conda-forge
scipy 1.10.1 py310h0975f3d_3 conda-forge
send2trash 1.8.2 pyhd1c38e8_0 conda-forge
setuptools 67.7.2 pyhd8ed1ab_0 conda-forge
six 1.16.0 pyh6c4a22f_0 conda-forge
sniffio 1.3.0 pyhd8ed1ab_0 conda-forge
soupsieve 2.3.2.post1 pyhd8ed1ab_0 conda-forge
stack_data 0.6.2 pyhd8ed1ab_0 conda-forge
terminado 0.17.1 pyhd1c38e8_0 conda-forge
tinycss2 1.2.1 pyhd8ed1ab_0 conda-forge
tk 8.6.12 he1e0b03_0 conda-forge
toolz 0.12.0 pyhd8ed1ab_0 conda-forge
tornado 6.3.2 py310h2aa6e3c_0 conda-forge
tqdm 4.65.0 pyhd8ed1ab_1 conda-forge
traitlets 5.9.0 pyhd8ed1ab_0 conda-forge
typing-extensions 4.5.0 hd8ed1ab_0 conda-forge
typing_extensions 4.5.0 pyha770c72_0 conda-forge
tzdata 2023c h71feb2d_0 conda-forge
uc-micro-py 1.0.1 pyhd8ed1ab_0 conda-forge
unicodedata2 15.0.0 py310h8e9501a_0 conda-forge
urllib3 1.26.15 pyhd8ed1ab_0 conda-forge
wcwidth 0.2.6 pyhd8ed1ab_0 conda-forge
webencodings 0.5.1 py_1 conda-forge
websocket-client 1.5.1 pyhd8ed1ab_0 conda-forge
wheel 0.40.0 pyhd8ed1ab_0 conda-forge
xarray 2023.5.0 pyhd8ed1ab_0 conda-forge
xorg-libxau 1.0.9 h27ca646_0 conda-forge
xorg-libxdmcp 1.1.3 h27ca646_0 conda-forge
xyzservices 2023.5.0 pyhd8ed1ab_1 conda-forge
xz 5.2.6 h57fd34a_0 conda-forge
yaml 0.2.5 h3422bc3_2 conda-forge
zeromq 4.3.4 hbdafb3b_1 conda-forge
zipp 3.15.0 pyhd8ed1ab_0 conda-forge
zstd 1.5.2 hf913c23_6 conda-forge