hubmapconsortium/ccf-asct-reporter

Use new column names for biomarkers

Closed this issue · 3 comments

Biomarker columns will now be named according to the mapping below.

  • In the ASCT+B API support the old naming Bx, but also support the new mapping as below. This should be a server only change.
  • Update data format markdown docs to reflect this.

Mapping:

  • Proteoform → BProteoform (NEW)
  • Lipid —> BLipid (NEW)
  • Metabolite —> BMetabolite (NEW)
  • Protein —> BProtein (Renamed from OLD BP)
  • Gene —>BGene (Renamed from OLD BG)

will give a commit in 5 mins