Support for BProtein +/- intermediate values in visualization and reports
emquardokus opened this issue · 0 comments
Problem: Flow cytometry reported BProtein values can be + (positive) , - (negative) or +/- (intermediate).
Currently the Reporter supports + or - but not +/-
The visualization shows for lymph node table v1.2 Vimentin +/ in the visualization because in the ASCT+B table it has an intermediate value : vimentin +/-
Spoke with @bherr2 4-26-2023 regarding the issue.
Support Need: represent +/- (intermediate) from ASCT+B tables for BProtein in visualization and reports
Thoughts: on implementation
Currently check for end value of + or - for protein biomarkers in ASCT+B tables, need to extend to +/-
Bruce 10:14 AM
This is what we report in the data currently:
ccf-asct-reporter/asctb-api/src/models/api.model.ts
Lines 36 to 40 in 7d74543
- @pbrm4 Bruce 10:43 AM
Ok, Pramod will just need to update this to check for +/- on the data side:ccf-asct-reporter/asctb-api/src/models/api.model.ts
Lines 116 to 127 in 7d74543
Visualization
-In the visualization + (positive) renders as a blue line connecting cell type to BProtein, - (negative) renders as a red line connecting cell type to BProtein. - We discussed and since red + blue = purple that this could be the line color for +/- (intermediate)?
- This would also need to be added to the upper left "Legend".