Parameters: SampleFilePath, SettingFile.csv
Python3 methyl_filter data_directory/mousefile.cov.gz input.csv
gene_name | chromosome_number | start_location | end_location
"cd3g" | 7 | 165722407 | 165724371
NOTE: chromosome_number, start_location, and end_location are the only required columns in the .csv file. The rest are optional and will be ignored by the program