/deoxys

Primary LanguageJupyter NotebookMIT LicenseMIT

deoxys

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Framework for running deep-learning experiments with emphasis on cancer tumor auto-segmentation.

Features

Applying different deep learning models on medical images

Build from source

Editable mode installation pip install -e .

Run test tox .

Environment setup

To run on CPU only (windows) set CUDA_VISIBLE_DEVICES=-1

To customize the number of iteration per epoch:

On Windows set ITER_PER_EPOCH=500

On Linux export ITER_PER_EPOCH=500