iDep execution in command line
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Luiky1 commented
Hello,
First of all, congrats for this amazing tool and many thanks for it continous mainteinance.
We are developing an RNAseq pipeline and we wonder to implement iDeep for the Differential Expression and Pathway analysis.
Is there any option, maybe an API or something similar, that allow us to install and launch iDeep as part of a pipeline only throught an R script, without using R-studio?
Thank you in advance.
Luis