ianjonsen

ianjonsen's Stars

• junyanz/CycleGAN

  Software that can generate photos from paintings, turn horses into zebras, perform style transfer, and more.

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• r-lib/actions

  GitHub Actions for the R community

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• fxcoudert/gfortran-for-macOS

  GNU Fortran (and GCC) compilers for macOS

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• eric-pedersen/mixed-effect-gams

  Repo for tutorial/paper on mixed-effect GAMs

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• TheoMichelot/hmmTMB

  Fit hidden Markov models using Template Model Builder (TMB): flexible state-dependent distributions, transition probability structures, random effects, and smoothing splines.

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• atsa-es/MARSS

  Multivariate Autoregressive State-Space Modeling with R

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• atsa-es/atsar

  Applied time series analysis in R with Stan. Allows fast Bayesian fitting of multivariate time-series models.

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• MikkoVihtakari/ggOceanMaps

  Plot oceanographic research data on maps using ggplot2

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• bmcclintock/momentuHMM

  Maximum likelihood analysis Of animal MovemENT behavior Using multivariate Hidden Markov Models

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• ropensci/rerddap

  R client for working with ERDDAP servers

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• ianjonsen/aniMotum

  fit latent variable movement models to animal tracking data

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• ericpante/marmap

  Import, plot and analyze bathymetric and topographic data

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• skaug/tmb-case-studies

  Worked examples in TMB (Template Model Builder)

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• AustralianAntarcticDivision/SOmap

  Southern Ocean round maps

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• mlysy/TMBtools

  Tools for Developing R Packages Interfacing with TMB

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• Trackage/traipse

  shared tools for track data

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• jmlondon/pathroutr

  R package for routing tracks around barrier polygons

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• mdsumner/nectar

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• AustralianAntarcticDivision/blueant

  Environmental data for Antarctic and Southern Ocean science

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• miguel-porto/SiMRiv

  Individual-based simulation of multistate movements in rivers, heterogeneous and homogeneous spaces incorporating local landscape bias in R

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• rmendels/rerddapXtracto

  xtractomactic using rerddap

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• positioning/kalmanfilter

  PFRP and LPRC geolocation packages for archival tagged marine animals

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• SCAR/RAATD

  Code and other goodies from the SCAR Retrospective Analysis of Antarctic Tracking Data (RAATD) project

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• SCAR/EGABIcourse19

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• natemiller/mapping

  Repo to illustrate various mapping functions

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• jsta/glatos

  Mirror of the glatos R package

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• MotusWTS/motusClient

  Fetch data from the motus server. This package is now deprecated in favor of https://www.github.com/MotusWTS/motus

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• PlanktonTeam/BioOceanObserver

  The code for a shiny app which displays IMOS biological data as part of the Biological Ocean Observer project

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• jbrzusto/sensorgnome-R-package

  R package for using telemetry data; soon to be replaced by http://github.com/jbrzusto/motus

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• positioning/positioning.github.io

  Companion website for geolocation tools

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