ianjonsen

ianjonsen's Stars

• MikkoVihtakari/ggOceanMaps

  Plot oceanographic research data on maps using ggplot2

  Language:R457

• PlanktonTeam/BioOceanObserver

  The code for a shiny app which displays IMOS biological data as part of the Biological Ocean Observer project

  Language:R2

• ianjonsen/aniMotum

  fit latent variable movement models to animal tracking data

  Language:HTML3813

• TheoMichelot/hmmTMB

  Fit hidden Markov models using Template Model Builder (TMB): flexible state-dependent distributions, transition probability structures, random effects, and smoothing splines.

  Language:R517

• natemiller/mapping

  Repo to illustrate various mapping functions

  Language:R5

• jmlondon/pathroutr

  R package for routing tracks around barrier polygons

  Language:R152

• fxcoudert/gfortran-for-macOS

  GNU Fortran (and GCC) compilers for macOS

  Language:Perl33656

• r-lib/actions

  GitHub Actions for the R community

  Language:TypeScript963210

• AustralianAntarcticDivision/blueant

  Environmental data for Antarctic and Southern Ocean science

  Language:R152

• bmcclintock/momentuHMM

  Maximum likelihood analysis Of animal MovemENT behavior Using multivariate Hidden Markov Models

  Language:R4019

• eric-pedersen/mixed-effect-gams

  Repo for tutorial/paper on mixed-effect GAMs

  Language:TeX12032

• jsta/glatos

  Mirror of the glatos R package

  Language:HTML2

• skaug/tmb-case-studies

  Worked examples in TMB (Template Model Builder)

  Language:C++3123

• mdsumner/nectar

  Language:Shell161

• mlysy/TMBtools

  Tools for Developing R Packages Interfacing with TMB

  Language:R243

• jbrzusto/sensorgnome-R-package

  R package for using telemetry data; soon to be replaced by http://github.com/jbrzusto/motus

  Language:R11

• Trackage/traipse

  shared tools for track data

  Language:R181

• junyanz/CycleGAN

  Software that can generate photos from paintings, turn horses into zebras, perform style transfer, and more.

  Language:Lua12.3k1.9k

• positioning/kalmanfilter

  PFRP and LPRC geolocation packages for archival tagged marine animals

  Language:R125

• positioning/positioning.github.io

  Companion website for geolocation tools

  Language:CSS1

• AustralianAntarcticDivision/SOmap

  Southern Ocean round maps

  Language:R246

• SCAR/EGABIcourse19

  Language:CSS108

• ericpante/marmap

  Import, plot and analyze bathymetric and topographic data

  Language:R307

• rmendels/rerddapXtracto

  xtractomactic using rerddap

  Language:R144

• miguel-porto/SiMRiv

  Individual-based simulation of multistate movements in rivers, heterogeneous and homogeneous spaces incorporating local landscape bias in R

  Language:R154

• SCAR/RAATD

  Code and other goodies from the SCAR Retrospective Analysis of Antarctic Tracking Data (RAATD) project

  Language:R112

• ropensci/rerddap

  R client for working with ERDDAP servers

  Language:R4014

• atsa-es/atsar

  Applied time series analysis in R with Stan. Allows fast Bayesian fitting of multivariate time-series models.

  Language:C++4916

• atsa-es/MARSS

  Multivariate Autoregressive State-Space Modeling with R

  Language:R5128

• MotusWTS/motusClient

  Fetch data from the motus server. This package is now deprecated in favor of https://www.github.com/MotusWTS/motus

  Language:R21