Feature: Sequence `install`
FrankZijlstra opened this issue · 0 comments
One main feature from pulseq that I personally use a lot at the scanner is the ability to install sequence files directly onto the host computer. In MATLAB pulseq this can be done with seq.install('siemens')
, for example. I implemented a script to do this with pypulseq a while ago, but wasn't really happy with how Siemens-focused this code is. I made a llittle draft of how I thought we could be doing this in pypulseq in a bit more modular way: https://gist.github.com/FrankZijlstra/4049470aaaa7698d952c019e036796e7
The base ScannerDefinition
class is the template for all seq.install()
actions: We need to be able to check if the scanner is available (connected to the right network, etc.), and if so, be able to install a sequence file on it. Pypulseq would keep track of available scanner definitions (e.g. SiemensDefinition
implements the Siemens-specific code that is available in MATLAB pulseq), but users would also be able to use pp.register_scanner
to provide their own implementation (though ideally pypulseq would provide implementations for the cases where the seq.install
workflow would be possible).
A scanner has a name, and optionally groups it belongs to, which can be used as the target for seq.install(target)
. E.g. all Siemens definitions will be in a 'siemens' group, so if I'm at a Siemens scanner, but don't know which one, seq.install('siemens')
would figure it out (more or less the behaviour of MATLAB pulseq). One feature that I do think is missing here is the option to bypass detecting the scanner, when I know for certain that everything works and I don't need to ping the scanner every time, maybe seq.install('siemens_nx', fast=True)
?.
Does this make sense? I'm also curious if someone else has experience with pulseq on vendors other than Siemens, whether a similar seq.install
workflow is even possible and could be implemented within this framework?