Having difficulty installing topicexplorer for python 3.7
Closed this issue · 4 comments
kirtansakariya commented
I just upgraded to python 3.7 for a class but now it won't let me install topicexplorer on it. For now, I'm using a virtual environment for python 3.6. I've copied and pasted the stack trace below:
Updating ./topicexplorer clone
Requirement already satisfied: bottle>=0.12.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (0.12.13)
Requirement already satisfied: brewer2mpl<1.5.0,>=1.4.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (1.4.1)
Requirement already satisfied: decorator>=4.0.5 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (4.3.0)
Requirement already satisfied: future>=0.16.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (0.16.0)
Requirement already satisfied: langdetect>=1.0.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (1.0.7)
Requirement already satisfied: matplotlib>=2.0.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (2.2.3)
Requirement already satisfied: mock>=2.0.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (2.0.0)
Requirement already satisfied: nltk<4.0.0,>=3.0.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (3.3)
Requirement already satisfied: notebook>=4.0.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (5.6.0)
Requirement already satisfied: numpy<2.0.0,>=1.11.3 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (1.15.1)
Requirement already satisfied: Paste==2.0.3 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (2.0.3)
Requirement already satisfied: pdfminer.six==20170720 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (20170720)
Requirement already satisfied: profilehooks>=1.8.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (1.10.0)
Requirement already satisfied: progressbar2>=3.18.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (3.38.0)
Requirement already satisfied: pybtex==0.21 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (0.21)
Requirement already satisfied: pystache==0.5.4 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (0.5.4)
Requirement already satisfied: requests>=2.14.2 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (2.19.1)
Requirement already satisfied: scikit_learn>=0.18.1 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (0.19.2)
Requirement already satisfied: scipy>=0.19.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (1.1.0)
Requirement already satisfied: snakeviz>=0.4.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (1.0.0)
Requirement already satisfied: sortedcontainers>=1.5.7 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (2.0.5)
Requirement already satisfied: ujson==1.35 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (1.35)
Requirement already satisfied: Unidecode in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (1.0.22)
Collecting vsm>=0.4.12 (from topicexplorer)
Using cached https://files.pythonhosted.org/packages/d0/de/496bacbeb4cca8ad44a0f9ea09c8ce7a77362d3f9e10b507c31b5099eb1e/vsm-0.4.12.tar.gz
Requirement already satisfied: waitress>=1.0.0 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (1.1.0)
Requirement already satisfied: webtest>=2.0.29 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (2.0.30)
Requirement already satisfied: wget>=3.2 in /anaconda3/lib/python3.7/site-packages (from topicexplorer) (3.2)
Requirement already satisfied: six in /anaconda3/lib/python3.7/site-packages (from langdetect>=1.0.0->topicexplorer) (1.11.0)
Requirement already satisfied: cycler>=0.10 in /anaconda3/lib/python3.7/site-packages (from matplotlib>=2.0.0->topicexplorer) (0.10.0)
Requirement already satisfied: pyparsing!=2.0.4,!=2.1.2,!=2.1.6,>=2.0.1 in /anaconda3/lib/python3.7/site-packages (from matplotlib>=2.0.0->topicexplorer) (2.2.0)
Requirement already satisfied: python-dateutil>=2.1 in /anaconda3/lib/python3.7/site-packages (from matplotlib>=2.0.0->topicexplorer) (2.7.3)
Requirement already satisfied: pytz in /anaconda3/lib/python3.7/site-packages (from matplotlib>=2.0.0->topicexplorer) (2018.5)
Requirement already satisfied: kiwisolver>=1.0.1 in /anaconda3/lib/python3.7/site-packages (from matplotlib>=2.0.0->topicexplorer) (1.0.1)
Requirement already satisfied: pbr>=0.11 in /anaconda3/lib/python3.7/site-packages (from mock>=2.0.0->topicexplorer) (4.2.0)
Requirement already satisfied: ipython-genutils in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (0.2.0)
Requirement already satisfied: tornado>=4 in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (5.1)
Requirement already satisfied: Send2Trash in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (1.5.0)
Requirement already satisfied: jupyter-client>=5.2.0 in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (5.2.3)
Requirement already satisfied: traitlets>=4.2.1 in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (4.3.2)
Requirement already satisfied: prometheus-client in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (0.3.1)
Requirement already satisfied: pyzmq>=17 in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (17.1.2)
Requirement already satisfied: nbformat in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (4.4.0)
Requirement already satisfied: nbconvert in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (5.4.0)
Requirement already satisfied: jinja2 in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (2.10)
Requirement already satisfied: terminado>=0.8.1 in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (0.8.1)
Requirement already satisfied: jupyter-core>=4.4.0 in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (4.4.0)
Requirement already satisfied: ipykernel in /anaconda3/lib/python3.7/site-packages (from notebook>=4.0.0->topicexplorer) (4.9.0)
Requirement already satisfied: pycryptodome in /anaconda3/lib/python3.7/site-packages (from pdfminer.six==20170720->topicexplorer) (3.6.6)
Requirement already satisfied: chardet in /anaconda3/lib/python3.7/site-packages (from pdfminer.six==20170720->topicexplorer) (3.0.4)
Requirement already satisfied: python-utils>=2.3.0 in /anaconda3/lib/python3.7/site-packages (from progressbar2>=3.18.0->topicexplorer) (2.3.0)
Requirement already satisfied: PyYAML>=3.01 in /anaconda3/lib/python3.7/site-packages (from pybtex==0.21->topicexplorer) (3.13)
Requirement already satisfied: latexcodec>=1.0.4 in /anaconda3/lib/python3.7/site-packages (from pybtex==0.21->topicexplorer) (1.0.5)
Requirement already satisfied: certifi>=2017.4.17 in /anaconda3/lib/python3.7/site-packages (from requests>=2.14.2->topicexplorer) (2018.8.24)
Requirement already satisfied: urllib3<1.24,>=1.21.1 in /anaconda3/lib/python3.7/site-packages (from requests>=2.14.2->topicexplorer) (1.23)
Requirement already satisfied: idna<2.8,>=2.5 in /anaconda3/lib/python3.7/site-packages (from requests>=2.14.2->topicexplorer) (2.7)
Requirement already satisfied: cython in /anaconda3/lib/python3.7/site-packages (from vsm>=0.4.12->topicexplorer) (0.28.5)
Requirement already satisfied: py4j in /anaconda3/lib/python3.7/site-packages (from vsm>=0.4.12->topicexplorer) (0.10.7)
Requirement already satisfied: translate in /anaconda3/lib/python3.7/site-packages (from vsm>=0.4.12->topicexplorer) (3.5.0)
Requirement already satisfied: beautifulsoup4 in /anaconda3/lib/python3.7/site-packages (from webtest>=2.0.29->topicexplorer) (4.6.3)
Requirement already satisfied: WebOb>=1.2 in /anaconda3/lib/python3.7/site-packages (from webtest>=2.0.29->topicexplorer) (1.8.2)
Requirement already satisfied: setuptools in /anaconda3/lib/python3.7/site-packages (from kiwisolver>=1.0.1->matplotlib>=2.0.0->topicexplorer) (40.2.0)
Requirement already satisfied: jsonschema!=2.5.0,>=2.4 in /anaconda3/lib/python3.7/site-packages (from nbformat->notebook>=4.0.0->topicexplorer) (2.6.0)
Requirement already satisfied: mistune>=0.8.1 in /anaconda3/lib/python3.7/site-packages (from nbconvert->notebook>=4.0.0->topicexplorer) (0.8.3)
Requirement already satisfied: pygments in /anaconda3/lib/python3.7/site-packages (from nbconvert->notebook>=4.0.0->topicexplorer) (2.2.0)
Requirement already satisfied: entrypoints>=0.2.2 in /anaconda3/lib/python3.7/site-packages (from nbconvert->notebook>=4.0.0->topicexplorer) (0.2.3)
Requirement already satisfied: bleach in /anaconda3/lib/python3.7/site-packages (from nbconvert->notebook>=4.0.0->topicexplorer) (2.1.4)
Requirement already satisfied: pandocfilters>=1.4.1 in /anaconda3/lib/python3.7/site-packages (from nbconvert->notebook>=4.0.0->topicexplorer) (1.4.2)
Requirement already satisfied: testpath in /anaconda3/lib/python3.7/site-packages (from nbconvert->notebook>=4.0.0->topicexplorer) (0.3.1)
Requirement already satisfied: defusedxml in /anaconda3/lib/python3.7/site-packages (from nbconvert->notebook>=4.0.0->topicexplorer) (0.5.0)
Requirement already satisfied: MarkupSafe>=0.23 in /anaconda3/lib/python3.7/site-packages (from jinja2->notebook>=4.0.0->topicexplorer) (1.0)
Requirement already satisfied: ipython>=4.0.0 in /anaconda3/lib/python3.7/site-packages (from ipykernel->notebook>=4.0.0->topicexplorer) (6.5.0)
Requirement already satisfied: pre-commit in /anaconda3/lib/python3.7/site-packages (from translate->vsm>=0.4.12->topicexplorer) (1.11.1)
Requirement already satisfied: lxml in /anaconda3/lib/python3.7/site-packages (from translate->vsm>=0.4.12->topicexplorer) (4.2.5)
Requirement already satisfied: tox in /anaconda3/lib/python3.7/site-packages (from translate->vsm>=0.4.12->topicexplorer) (3.4.0)
Requirement already satisfied: click in /anaconda3/lib/python3.7/site-packages (from translate->vsm>=0.4.12->topicexplorer) (6.7)
Requirement already satisfied: html5lib!=1.0b1,!=1.0b2,!=1.0b3,!=1.0b4,!=1.0b5,!=1.0b6,!=1.0b7,!=1.0b8,>=0.99999999pre in /anaconda3/lib/python3.7/site-packages (from bleach->nbconvert->notebook>=4.0.0->topicexplorer) (1.0.1)
Requirement already satisfied: prompt-toolkit<2.0.0,>=1.0.15 in /anaconda3/lib/python3.7/site-packages (from ipython>=4.0.0->ipykernel->notebook>=4.0.0->topicexplorer) (1.0.15)
Requirement already satisfied: pexpect; sys_platform != "win32" in /anaconda3/lib/python3.7/site-packages (from ipython>=4.0.0->ipykernel->notebook>=4.0.0->topicexplorer) (4.6.0)
Requirement already satisfied: appnope; sys_platform == "darwin" in /anaconda3/lib/python3.7/site-packages (from ipython>=4.0.0->ipykernel->notebook>=4.0.0->topicexplorer) (0.1.0)
Requirement already satisfied: pickleshare in /anaconda3/lib/python3.7/site-packages (from ipython>=4.0.0->ipykernel->notebook>=4.0.0->topicexplorer) (0.7.4)
Requirement already satisfied: simplegeneric>0.8 in /anaconda3/lib/python3.7/site-packages (from ipython>=4.0.0->ipykernel->notebook>=4.0.0->topicexplorer) (0.8.1)
Requirement already satisfied: backcall in /anaconda3/lib/python3.7/site-packages (from ipython>=4.0.0->ipykernel->notebook>=4.0.0->topicexplorer) (0.1.0)
Requirement already satisfied: jedi>=0.10 in /anaconda3/lib/python3.7/site-packages (from ipython>=4.0.0->ipykernel->notebook>=4.0.0->topicexplorer) (0.12.1)
Requirement already satisfied: virtualenv in /anaconda3/lib/python3.7/site-packages (from pre-commit->translate->vsm>=0.4.12->topicexplorer) (16.0.0)
Requirement already satisfied: aspy.yaml in /anaconda3/lib/python3.7/site-packages (from pre-commit->translate->vsm>=0.4.12->topicexplorer) (1.1.1)
Requirement already satisfied: toml in /anaconda3/lib/python3.7/site-packages (from pre-commit->translate->vsm>=0.4.12->topicexplorer) (0.9.6)
Requirement already satisfied: identify>=1.0.0 in /anaconda3/lib/python3.7/site-packages (from pre-commit->translate->vsm>=0.4.12->topicexplorer) (1.1.6)
Requirement already satisfied: cfgv>=1.0.0 in /anaconda3/lib/python3.7/site-packages (from pre-commit->translate->vsm>=0.4.12->topicexplorer) (1.1.0)
Requirement already satisfied: nodeenv>=0.11.1 in /anaconda3/lib/python3.7/site-packages (from pre-commit->translate->vsm>=0.4.12->topicexplorer) (1.3.2)
Requirement already satisfied: cached-property in /anaconda3/lib/python3.7/site-packages (from pre-commit->translate->vsm>=0.4.12->topicexplorer) (1.5.1)
Requirement already satisfied: py<2,>=1.4.17 in /anaconda3/lib/python3.7/site-packages (from tox->translate->vsm>=0.4.12->topicexplorer) (1.6.0)
Requirement already satisfied: pluggy<1,>=0.3.0 in /anaconda3/lib/python3.7/site-packages (from tox->translate->vsm>=0.4.12->topicexplorer) (0.7.1)
Requirement already satisfied: webencodings in /anaconda3/lib/python3.7/site-packages (from html5lib!=1.0b1,!=1.0b2,!=1.0b3,!=1.0b4,!=1.0b5,!=1.0b6,!=1.0b7,!=1.0b8,>=0.99999999pre->bleach->nbconvert->notebook>=4.0.0->topicexplorer) (0.5.1)
Requirement already satisfied: wcwidth in /anaconda3/lib/python3.7/site-packages (from prompt-toolkit<2.0.0,>=1.0.15->ipython>=4.0.0->ipykernel->notebook>=4.0.0->topicexplorer) (0.1.7)
Requirement already satisfied: ptyprocess>=0.5 in /anaconda3/lib/python3.7/site-packages (from pexpect; sys_platform != "win32"->ipython>=4.0.0->ipykernel->notebook>=4.0.0->topicexplorer) (0.6.0)
Requirement already satisfied: parso>=0.3.0 in /anaconda3/lib/python3.7/site-packages (from jedi>=0.10->ipython>=4.0.0->ipykernel->notebook>=4.0.0->topicexplorer) (0.3.1)
Building wheels for collected packages: vsm
Running setup.py bdist_wheel for vsm: started
Running setup.py bdist_wheel for vsm: finished with status 'error'
Complete output from command /anaconda3/bin/python -u -c "import setuptools, tokenize;__file__='/private/var/folders/l7/kt19cfqx58d30m8_ts0nc10c0000gn/T/pip-install-lo304qs2/vsm/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" bdist_wheel -d /private/var/folders/l7/kt19cfqx58d30m8_ts0nc10c0000gn/T/pip-wheel-s6bgxm_m --python-tag cp37:
running bdist_wheel
running build
running build_py
creating build
creating build/lib.macosx-10.7-x86_64-3.7
creating build/lib.macosx-10.7-x86_64-3.7/vsm
creating build/lib.macosx-10.7-x86_64-3.7/vsm/corpus
copying vsm/corpus/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/corpus
copying vsm/corpus/base.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/corpus
creating build/lib.macosx-10.7-x86_64-3.7/vsm/exceptions
copying vsm/exceptions/compatibility.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/exceptions
copying vsm/exceptions/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/exceptions
creating build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/multi_k.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/ldasentences.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/inpho.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/editions.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/trans.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/htrc.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
creating build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/beagleviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/labeleddata.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/tfviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/lsaviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/ldacgsviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/types.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/wrappers.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/tfidfviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/ldagibbsviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
creating build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/beaglecontext.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldacgsmulti.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/lda.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/lsa.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldacgs.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldacgsseq.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/tf.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldagibbs.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldafunctions.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/beagleenvironment.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/beaglecomposite.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldaexact.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/beagleorder.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/tfidf.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/base.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
creating build/lib.macosx-10.7-x86_64-3.7/vsm/corpus/util
copying vsm/corpus/util/corpusbuilders.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/corpus/util
copying vsm/corpus/util/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/corpus/util
creating build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/interop
copying vsm/extensions/interop/mallet.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/interop
copying vsm/extensions/interop/ldac.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/interop
copying vsm/extensions/interop/weka.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/interop
copying vsm/extensions/interop/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/interop
creating build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/clustering
copying vsm/extensions/clustering/manifold.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/clustering
copying vsm/extensions/clustering/plotting.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/clustering
copying vsm/extensions/clustering/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/clustering
creating build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/corpusbuilders
copying vsm/extensions/corpusbuilders/corpusbuilders.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/corpusbuilders
copying vsm/extensions/corpusbuilders/util.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/corpusbuilders
copying vsm/extensions/corpusbuilders/corpusstreamers.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/corpusbuilders
copying vsm/extensions/corpusbuilders/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/corpusbuilders
copying vsm/zipfile.py -> build/lib.macosx-10.7-x86_64-3.7/vsm
copying vsm/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm
copying vsm/spatial.py -> build/lib.macosx-10.7-x86_64-3.7/vsm
copying vsm/split.py -> build/lib.macosx-10.7-x86_64-3.7/vsm
copying vsm/structarr.py -> build/lib.macosx-10.7-x86_64-3.7/vsm
running build_ext
building 'vsm.model._cgs_update' extension
creating build/temp.macosx-10.7-x86_64-3.7
creating build/temp.macosx-10.7-x86_64-3.7/vsm
creating build/temp.macosx-10.7-x86_64-3.7/vsm/model
gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/anaconda3/include -arch x86_64 -I/anaconda3/include -arch x86_64 -I/anaconda3/lib/python3.7/site-packages/numpy/core/include -I/anaconda3/include/python3.7m -c vsm/model/_cgs_update.cpp -o build/temp.macosx-10.7-x86_64-3.7/vsm/model/_cgs_update.o
In file included from vsm/model/_cgs_update.cpp:465:
In file included from /anaconda3/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:
In file included from /anaconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18:
In file included from /anaconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1823:
/anaconda3/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
#warning "Using deprecated NumPy API, disable it by " \
^
vsm/model/_cgs_update.cpp:25484:21: error: no member named 'exc_type' in '_ts'
*type = tstate->exc_type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:25485:22: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
*value = tstate->exc_value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:25486:19: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
*tb = tstate->exc_traceback;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
vsm/model/_cgs_update.cpp:25493:24: error: no member named 'exc_type' in '_ts'
tmp_type = tstate->exc_type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:25494:25: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
tmp_value = tstate->exc_value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:25495:22: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
tmp_tb = tstate->exc_traceback;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
vsm/model/_cgs_update.cpp:25496:13: error: no member named 'exc_type' in '_ts'
tstate->exc_type = type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:25497:13: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
tstate->exc_value = value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:25498:13: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
tstate->exc_traceback = tb;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
vsm/model/_cgs_update.cpp:25553:24: error: no member named 'exc_type' in '_ts'
tmp_type = tstate->exc_type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:25554:25: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
tmp_value = tstate->exc_value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:25555:22: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
tmp_tb = tstate->exc_traceback;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
vsm/model/_cgs_update.cpp:25556:13: error: no member named 'exc_type' in '_ts'
tstate->exc_type = local_type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:25557:13: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
tstate->exc_value = local_value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:25558:13: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
tstate->exc_traceback = local_tb;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
vsm/model/_cgs_update.cpp:26101:65: error: too many arguments to function call, expected 3, have 4
return (*((__Pyx_PyCFunctionFast)meth)) (self, args, nargs, NULL);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^~~~
/Library/Developer/CommandLineTools/usr/lib/clang/10.0.0/include/stddef.h:100:18: note: expanded from macro 'NULL'
# define NULL __null
^~~~~~
vsm/model/_cgs_update.cpp:27351:24: error: no member named 'exc_type' in '_ts'
tmp_type = tstate->exc_type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:27352:25: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
tmp_value = tstate->exc_value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:27353:22: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
tmp_tb = tstate->exc_traceback;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
1 warning and 20 errors generated.
error: command 'gcc' failed with exit status 1
----------------------------------------
Running setup.py clean for vsm
Failed to build vsm
Installing collected packages: vsm, topicexplorer
Running setup.py install for vsm: started
Running setup.py install for vsm: finished with status 'error'
Complete output from command /anaconda3/bin/python -u -c "import setuptools, tokenize;__file__='/private/var/folders/l7/kt19cfqx58d30m8_ts0nc10c0000gn/T/pip-install-lo304qs2/vsm/setup.py';f=getattr(tokenize, 'open', open)(__file__);code=f.read().replace('\r\n', '\n');f.close();exec(compile(code, __file__, 'exec'))" install --record /private/var/folders/l7/kt19cfqx58d30m8_ts0nc10c0000gn/T/pip-record-ni87j127/install-record.txt --single-version-externally-managed --compile:
running install
running build
running build_py
creating build
creating build/lib.macosx-10.7-x86_64-3.7
creating build/lib.macosx-10.7-x86_64-3.7/vsm
creating build/lib.macosx-10.7-x86_64-3.7/vsm/corpus
copying vsm/corpus/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/corpus
copying vsm/corpus/base.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/corpus
creating build/lib.macosx-10.7-x86_64-3.7/vsm/exceptions
copying vsm/exceptions/compatibility.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/exceptions
copying vsm/exceptions/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/exceptions
creating build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/multi_k.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/ldasentences.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/inpho.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/editions.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/trans.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
copying vsm/extensions/htrc.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions
creating build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/beagleviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/labeleddata.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/tfviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/lsaviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/ldacgsviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/types.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/wrappers.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/tfidfviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
copying vsm/viewer/ldagibbsviewer.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/viewer
creating build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/beaglecontext.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldacgsmulti.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/lda.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/lsa.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldacgs.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldacgsseq.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/tf.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldagibbs.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldafunctions.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/beagleenvironment.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/beaglecomposite.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/ldaexact.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/beagleorder.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/tfidf.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
copying vsm/model/base.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/model
creating build/lib.macosx-10.7-x86_64-3.7/vsm/corpus/util
copying vsm/corpus/util/corpusbuilders.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/corpus/util
copying vsm/corpus/util/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/corpus/util
creating build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/interop
copying vsm/extensions/interop/mallet.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/interop
copying vsm/extensions/interop/ldac.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/interop
copying vsm/extensions/interop/weka.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/interop
copying vsm/extensions/interop/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/interop
creating build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/clustering
copying vsm/extensions/clustering/manifold.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/clustering
copying vsm/extensions/clustering/plotting.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/clustering
copying vsm/extensions/clustering/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/clustering
creating build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/corpusbuilders
copying vsm/extensions/corpusbuilders/corpusbuilders.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/corpusbuilders
copying vsm/extensions/corpusbuilders/util.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/corpusbuilders
copying vsm/extensions/corpusbuilders/corpusstreamers.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/corpusbuilders
copying vsm/extensions/corpusbuilders/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm/extensions/corpusbuilders
copying vsm/zipfile.py -> build/lib.macosx-10.7-x86_64-3.7/vsm
copying vsm/__init__.py -> build/lib.macosx-10.7-x86_64-3.7/vsm
copying vsm/spatial.py -> build/lib.macosx-10.7-x86_64-3.7/vsm
copying vsm/split.py -> build/lib.macosx-10.7-x86_64-3.7/vsm
copying vsm/structarr.py -> build/lib.macosx-10.7-x86_64-3.7/vsm
running build_ext
building 'vsm.model._cgs_update' extension
creating build/temp.macosx-10.7-x86_64-3.7
creating build/temp.macosx-10.7-x86_64-3.7/vsm
creating build/temp.macosx-10.7-x86_64-3.7/vsm/model
gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/anaconda3/include -arch x86_64 -I/anaconda3/include -arch x86_64 -I/anaconda3/lib/python3.7/site-packages/numpy/core/include -I/anaconda3/include/python3.7m -c vsm/model/_cgs_update.cpp -o build/temp.macosx-10.7-x86_64-3.7/vsm/model/_cgs_update.o
In file included from vsm/model/_cgs_update.cpp:465:
In file included from /anaconda3/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4:
In file included from /anaconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:18:
In file included from /anaconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1823:
/anaconda3/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings]
#warning "Using deprecated NumPy API, disable it by " \
^
vsm/model/_cgs_update.cpp:25484:21: error: no member named 'exc_type' in '_ts'
*type = tstate->exc_type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:25485:22: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
*value = tstate->exc_value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:25486:19: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
*tb = tstate->exc_traceback;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
vsm/model/_cgs_update.cpp:25493:24: error: no member named 'exc_type' in '_ts'
tmp_type = tstate->exc_type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:25494:25: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
tmp_value = tstate->exc_value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:25495:22: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
tmp_tb = tstate->exc_traceback;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
vsm/model/_cgs_update.cpp:25496:13: error: no member named 'exc_type' in '_ts'
tstate->exc_type = type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:25497:13: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
tstate->exc_value = value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:25498:13: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
tstate->exc_traceback = tb;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
vsm/model/_cgs_update.cpp:25553:24: error: no member named 'exc_type' in '_ts'
tmp_type = tstate->exc_type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:25554:25: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
tmp_value = tstate->exc_value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:25555:22: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
tmp_tb = tstate->exc_traceback;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
vsm/model/_cgs_update.cpp:25556:13: error: no member named 'exc_type' in '_ts'
tstate->exc_type = local_type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:25557:13: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
tstate->exc_value = local_value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:25558:13: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
tstate->exc_traceback = local_tb;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
vsm/model/_cgs_update.cpp:26101:65: error: too many arguments to function call, expected 3, have 4
return (*((__Pyx_PyCFunctionFast)meth)) (self, args, nargs, NULL);
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^~~~
/Library/Developer/CommandLineTools/usr/lib/clang/10.0.0/include/stddef.h:100:18: note: expanded from macro 'NULL'
# define NULL __null
^~~~~~
vsm/model/_cgs_update.cpp:27351:24: error: no member named 'exc_type' in '_ts'
tmp_type = tstate->exc_type;
~~~~~~ ^
vsm/model/_cgs_update.cpp:27352:25: error: no member named 'exc_value' in '_ts'; did you mean 'curexc_value'?
tmp_value = tstate->exc_value;
^~~~~~~~~
curexc_value
/anaconda3/include/python3.7m/pystate.h:237:15: note: 'curexc_value' declared here
PyObject *curexc_value;
^
vsm/model/_cgs_update.cpp:27353:22: error: no member named 'exc_traceback' in '_ts'; did you mean 'curexc_traceback'?
tmp_tb = tstate->exc_traceback;
^~~~~~~~~~~~~
curexc_traceback
/anaconda3/include/python3.7m/pystate.h:238:15: note: 'curexc_traceback' declared here
PyObject *curexc_traceback;
^
fatal error: too many errors emitted, stopping now [-ferror-limit=]
1 warning and 20 errors generated.
error: command 'gcc' failed with exit status 1
----------------------------------------
colinallen commented
Looks like numpy may need to be updated. On my laptop the current version is numpy==1.12.1
but https://pypi.org/project/numpy/1.15.2/ is the latest version. What's your version, and what happens if you update it?
kirtansakariya commented
I just updated numpy to 1.15.2, but the error with vsm is still there.
kirtansakariya commented
I think everything else installs properly, just not vsm right now.
kirtansakariya commented
Issue moved to: inpho/vsm#167