jacob-rosenthal

jacob-rosenthal's Stars

• rapidsai/cucim

  cuCIM - RAPIDS GPU-accelerated image processing library

  Language:Jupyter Notebook35360

• Elucidation/tensorflow_chessbot

  Predict chessboard FEN layouts from images using TensorFlow

  Language:Jupyter Notebook51997

• DigitalSlideArchive/digital_slide_archive

  The official deployment of the Digital Slide Archive and HistomicsTK.

  Language:Python11050

• mahmoodlab/HIPT

  Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)

  Language:Jupyter Notebook50990

• msk-mind/luna

  Scripts for data processing

  Language:Jupyter Notebook4010

• Principles-of-Biostatistics/3rd-Edition

  Language:R205

• yaglm/yaglm

  A python package for penalized generalized linear models that supports fitting and model selection for structured, adaptive and non-convex penalties.

  Language:Python5515

• girder/large_image

  Python modules to work with large multiresolution images.

  Language:Python19443

• j3soon/arxiv-utils

  Meaningful titles for tabs and PDF downloads! Also supports tab search.

  Language:JavaScript28819

• Bayer-Group/tiffslide

  TiffSlide - cloud native openslide-python replacement based on tifffile

  Language:Python8512

• hms-dbmi/viv

  Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.

  Language:JavaScript28446

• google/python-fire

  Python Fire is a library for automatically generating command line interfaces (CLIs) from absolutely any Python object.

  Language:Python27.1k1.4k

• google-deepmind/dm_pix

  PIX is an image processing library in JAX, for JAX.

  Language:Python38722

• pyscript/pyscript

  PyScript is an open source platform for Python in the browser. Try PyScript: https://pyscript.com Examples: https://tinyurl.com/pyscript-examples Community: https://discord.gg/HxvBtukrg2

  Language:Python18k1.4k

• slideflow/slideflow

  Powerful, open-source AI tools for digital pathology.

  Language:Python26244

• mlcommons/medperf

  An open benchmarking platform for medical artificial intelligence using Federated Evaluation.

  Language:Python14430

• phlippe/uvadlc_notebooks

  Repository of Jupyter notebook tutorials for teaching the Deep Learning Course at the University of Amsterdam (MSc AI), Fall 2023

  Language:Jupyter Notebook2.6k580

• manubot/manubot

  Python utilities for Manubot: Manuscripts, open and automated

  Language:Python43142

• NVlabs/tiny-cuda-nn

  Lightning fast C++/CUDA neural network framework

  Language:C++3.7k454

• broadinstitute/Tangram

  Spatial alignment of single cell transcriptomic data.

  Language:Jupyter Notebook25451

• JEFworks-Lab/genomic-data-visualization-2022

  Course website for Genomic Data Visualization 2022

  Language:JavaScript1618

• Richarizardd/Self-Supervised-ViT-Path

  Self-Supervised Vision Transformers Learn Visual Concepts in Histopathology (LMRL Workshop, NeurIPS 2021)

  Language:Jupyter Notebook13818

• imagej/pyimagej

  Use ImageJ from Python

  Language:Python47482

• labsyspharm/cylinter

  An Interactive Image Segmentation Filter for Multiplex Microscopy

  Language:Python2512

• vitessce/vitessce-python

  Python API and Jupyter widget for Vitessce

  Language:Python407

• nolanlab/REDSEA

  Language:Jupyter Notebook1710

• msalvaris/DaskMaskRCNN

  Running Mask-RCNN on Dask with PyTorch

  Language:Python273

• ahmedfgad/GeneticAlgorithmPython

  Source code of PyGAD, a Python 3 library for building the genetic algorithm and training machine learning algorithms (Keras & PyTorch).

  Language:Python1.9k462

• official-stockfish/Stockfish

  A free and strong UCI chess engine

  Language:C++11.6k2.3k

• python-microscopy/python-microscopy

  The python-microscopy environment - an open-source package for light microscopy

  Language:Python8425