"Fail to install 'qiime2R' from Gitub

[cortegas]

Hi,
I tried to install the package the R studio through devtools and through remotes, neither of them worked.
Here is the code that the output error

library(remotes) 
remotes::install_github("jbisanz/qiime2R")

Downloading GitHub repo jbisanz/qiime2R@master
Skipping 12 packages ahead of CRAN: Biostrings, biomformat, phyloseq, BiocGenerics, S4Vectors, IRanges, XVector, rhdf5, Biobase, multtest, zlibbioc, Rhdf5lib
Error: Failed to install 'qiime2R' from GitHub:s6gqzfn4v15p_mcs36ytm140000gn/T/RtmpDUCyxB/remotes89c2bec9f5/jbisanz-qiime2R-3fc6241/DESCRIPTION’ ...
lazy-load database '/Library/Frameworks/R.framework/Versions/3.6/Resources/library/prettyunits/R/prettyunits.rdb' is corrupt
In addition: Warning messages:
1: In paste0(" (", pretty_dt(elapsed), ")") :
restarting interrupted promise evaluation
2: In paste0(" (", pretty_dt(elapsed), ")") :
internal error -3 in R_decompress1

Same output but doing with devtools.

library(devtools)
devtools::install_github("jbisanz/qiime2R")

Downloading GitHub repo jbisanz/qiime2R@master
Skipping 12 packages ahead of CRAN: Biostrings, biomformat, phyloseq, BiocGenerics, S4Vectors, IRanges, XVector, rhdf5, Biobase, multtest, zlibbioc, Rhdf5lib
Error: Failed to install 'qiime2R' from GitHub:s6gqzfn4v15p_mcs36ytm140000gn/T/RtmpDUCyxB/remotes89ca5a1498/jbisanz-qiime2R-3fc6241/DESCRIPTION’ ...
lazy-load database '/Library/Frameworks/R.framework/Versions/3.6/Resources/library/prettyunits/R/prettyunits.rdb' is corrupt
In addition: Warning messages:
1: In paste0(" (", pretty_dt(elapsed), ")") :
restarting interrupted promise evaluation
2: In paste0(" (", pretty_dt(elapsed), ")") :
internal error -3 in R_decompress1

Does anyone had the same error or knows what is about the corrupt?

Thank you!

Stay safe.

[jbisanz]

I suspect this issue could be solved by reinstalling prettyunits as this appears to be triggering the issue. Please try install.packages("prettyunits") and then restart your R session before trying to reinstall using devtools::install_github(). Let me know how it goes,
Jordan

[cortegas]

Hi Jordan,

Perfect. It worked.

Thank you!

[jbisanz]

Great!