jhuapl-bio/pathogenesis-gene-ontology

Siderophores as virulence factors--the single case where it "works"

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By now you know my objection to the inclusion of siderophores in PathGO. In short, these are involved with

  1. Nutrition-without these things, the microbe (bacterium) would perish in any environment where the metal in question is scarce.
  2. Do not harm the host in any way (no pathogenesis results)

The one exception to this is where the metal-scavenging factor has evolved specifically to strip a particular host protein (like hemoglobin) of its metal cofactor. I have documented two instances of this and have designated both of them with:
PATHGO:0000066 (mediates iron acquisition from another organism)

(See how I'm changing the name to make it obvious what is going on?)

Attribution

https://orcid.org/0000-0002-5702-4690