add better support for conda

Question

akhanf opened this issue 3 years ago · 2 comments

Currently we are using poetry for dependency management, but could be nice to also add direct support for conda (e.g. avoiding problems as in #168).

Could:

create a conda environment file for hippunfold as a whole (using conda packages where available)
add hippunfold to conda-forge

With conda-forge could perhaps even package binaries for the external dependencies.. Something to consider..

Answer 1 · 2024-06-04T16:13:44.000Z

Just wanted to bump this as discussed in our devs meeting

(June 4, 2024)

Nighres may be challenging but not too bad: nighres/nighres#173

I'll try to play around with this too when i get the chance :)

Answer 2 · 2024-06-04T17:06:51.000Z

Great!

I have a basic set of recipes in order to get the snakebids conda package built, just need to revisit it:
https://github.com/akhanf/conda-snakebids-builds