Wrong figure
ChackyShaker opened this issue · 0 comments
I tried to programing following "Semi supervised Grade of Membership models for RNA-seqdata using classtpx"PDF .
I ran these code written PDF for omega.fix()
from
Topic_clus <- classtpx::class_topics(leng_data,K=3,known_samples = known_samples,class_labs = class_labs,method="omega.fix",tol=0.01)
to
CountClust::StructureGGplot(omega = omega,annotation = annotation,palette = RColorBrewer::brewer.pal(8, "Accent"),yaxis_label = "Cell cycle phase",order_sample = TRUE,axis_tick = list(axis_ticks_length = .1,axis_ticks_lwd_y = .1,axis_ticks_lwd_x = .1,axis_label_size = 7,axis_label_face = "bold"))
But a picture different from the one shown was displayed in PDF.(looks like method theta.prior)
Please check once and tell me the reason.