kschan0214/sepia

Question regarding phase unwrapping

Closed this issue · 1 comments

Hello.
For phase unwrapping, there is option for mask.
I want to ask if the brain mask provided (which is better than default BET), can be used for such purposes.
Thanks.

Best,
Ho-Joon Lee

Hi Ho-Joon,

Yes, you can specify your own mask on the GUI:
Screenshot 2023-11-01 at 22 23 07

The mask file has to be in the NIFTI format (.nii or .nii.gz).

Let me know if you encounter any issue.

Best,

Kwok