kthlnktng

kthlnktng's Stars

• igordot/genomics

  A collection of scripts and notes related to genomics and bioinformatics

  Language:R20154

• igordot/tutorials

  Language:HTML74

• gto76/python-cheatsheet

  Comprehensive Python Cheatsheet

  Language:Python36.6k6.5k

• wreillo/research-computing

  Research Computing Organizations

  Language:HTML11

• hbs-rcs/versioning_data_scripts

  Hands-on workshop for using the Git GUI GitKraken

  Language:R79

• hakluke/how-to-exit-vim

  Below are some simple methods for exiting vim.

  7.1k319

• dylanaraps/pure-bash-bible

  📖 A collection of pure bash alternatives to external processes.

  Language:Shell36.7k3.3k

• mr-c/shouldacite

  Should you cite this software?

  Language:CSS302

• nf-core/rnaseq

  RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

  Language:Nextflow947713

• tompollard/phd_thesis_markdown

  Template for writing a PhD thesis in Markdown

  Language:HTML1.2k557

• jlevy/the-art-of-command-line

  Master the command line, in one page

  154k14.6k

• TheAlgorithms/Python

  All Algorithms implemented in Python

  Language:Python196k46k

• marcpresler/OccupancyMS

  An algorithm to calculate the site stoichiometry of a phospho-sites or other modifications measured under multiple conditions with quantitative mass spectrometry. The approach for single sites is implemented in MATLAB for datasets of an arbitrary size. A proof-of-principal script in three dimensions is included as well.

  Language:Matlab1

• gabrielecirulli/2048

  The source code for 2048

  Language:JavaScript12.3k17.1k

• alexdobin/STAR

  RNA-seq aligner

  Language:C1.9k508

• pomber/git-history

  Quickly browse the history of a file from any git repository

  Language:JavaScript13.6k535

• IQSS/datafest

  Materials and code for Harvard DataFest workshop

  Language:HTML3745

• KasperSkytte/ampvis2

  Tools for visualising microbial community amplicon data

  Language:R6824

• minimaxir/big-list-of-naughty-strings

  The Big List of Naughty Strings is a list of strings which have a high probability of causing issues when used as user-input data.

  Language:Python46.4k2.1k

• learnbyexample/Command-line-text-processing

  :zap: From finding text to search and replace, from sorting to beautifying text and more :art:

  Language:Shell10.2k710

• lindsayrutter/bigPint

  Bioconductor package that makes BIG data pint-sized.

  Language:HTML207

• hackseq/modular-assembly-hs18

  Mix and match modular genome assembler components

  Language:Makefile89

• NCBI-Hackathons/EDirectCookbook

  16154

• lh3/hickit

  TAD calling, phase imputation, 3D modeling and more for diploid single-cell Hi-C (Dip-C) and general Hi-C

  Language:C10811

• kblin/ncbi-acc-download

  Download files from NCBI Entrez by accession

  Language:Python1128

• kblin/ncbi-genome-download

  Scripts to download genomes from the NCBI FTP servers

  Language:Python969173

• DRL/blobtools

  Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets

  Language:Python19544

• practical-tutorials/project-based-learning

  Curated list of project-based tutorials

  209k27.3k

• mkaz/termgraph

  a python command-line tool which draws basic graphs in the terminal

  Language:Python3.2k165

• Avik-Jain/100-Days-Of-ML-Code

  100 Days of ML Coding

  45.9k10.7k