chrombpnet_deepshap command not found
saninta0212 opened this issue · 1 comments
saninta0212 commented
I am trying to generate deepSHAP values and run TF-modisco on the deepSHAP contribution scores. However, running script from here (https://github.com/kundajelab/chrombpnet/tree/master/chrombpnet/evaluation/interpret) is giving me an error: chrombpnet_deepshap: command not found. I could run modisco report and the other commands but not the chrombpnet_deepshap. Some help on this would be appreciated!
panushri25 commented
Sorry that README is outdated. I will remove it, please follow the tutorial links here - https://github.com/kundajelab/chrombpnet/wiki