problem in 'motif hit calling'

[GGboy-Zzz]

Hi,
Sorry to pose issue here for 'finemo_gpu' error, but I need to get some support qucikly.
my code as above,

1. finemo extract-regions-chrombpnet-h5 -c ${sample}.profile_scores.h5 -o$outdir/${sample}`
2. finemo call-hits -M pp -r ${sample}.npz -m ${sample}_modisco.h5 -p ${sample}_peaks_no_blacklist.bed \ -d cuda -o $outdir/${sample} `

the generate error is：
in call_hits raise ValueError(f"Input sequences of shape {sequences.shape} and/or " ValueError: Input sequences of shape (368638, 4, 1000) and/or input contributions of shape (368638, 4, 1000) are not compatible with region count of 368651
I checked the 'finemo/main.py', and I found there is a different number of pekas in my regions file and peaks file, but I'm sure that when when generated contribution score h5, I used the same narrow peaks file as here. I didnt know what happened, and hope your suggestions, thanks!

[austintwang]

Hello! I've replied to your original post here:
austintwang/finemo_gpu#21 (comment)