at=list error "undefined columns selected"
mariebk opened this issue · 1 comments
mariebk commented
Hello community, I am a R beginner! Maybe there is an easy solution and you can help? Sorry for not providing a dataset, every single step in R is hard for me. Thanks for your help!
Please specify whether your issue is about:
- a possible bug
- a question about package functionality
- a suggested code or documentation change, improvement to the code, or feature request
If you are reporting (1) a bug or (2) a question about code, please supply:
- a fully reproducible example using a publicly available dataset (or provide your data)
- if an error is occurring, include the output of
traceback()run immediately after the error occurs - the output of
sessionInfo()
Put your code here:
## load package
library("margins")
## code goes here
reg_detachment_wtcbreaks_model4 <- lm(formula = detachment ~ dummy1 + dummy2 + dummy3 + dummy4 + dummy5 + dummy6 + continuous + dummy7 + age + wtc_breaks + age*wtc_breaks, data=data_final) # all dummies are factors, the others are dbl+lbl
margins::margins(reg_detachment_wtcbreaks_model4, variables="wtc_breaks", at=list(age=c(23,24,25))) # works fine if I run it without the at-argument
## error message
> traceback()
8: stop("undefined columns selected")
7: `[.data.frame`(dat, , not_numeric, drop = FALSE)
6: dat[, not_numeric, drop = FALSE]
5: check_values(data, at)
4: check_at(data, at)
3: build_datalist(data, at = at)
2: margins.lm(reg_detachment_wtcbreaks_model4, variables = "wtc_breaks",
at = list(age = c(23, 24, 25)))
1: margins::margins(reg_detachment_wtcbreaks_model4, variables = "wtc_breaks",
at = list(age = c(23, 24, 25)))
## sessionInfo
R version 4.1.0 (2021-05-18)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19042)
Matrix products: default
locale:
[1] LC_COLLATE=German_Germany.1252 LC_CTYPE=German_Germany.1252 LC_MONETARY=German_Germany.1252
[4] LC_NUMERIC=C LC_TIME=German_Germany.1252
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] margins_0.3.26 Hmisc_4.5-0 ggplot2_3.3.3 Formula_1.2-4 survival_3.2-11 lattice_0.20-44 sjPlot_2.8.8
[8] ggeffects_1.1.0 lavaan_0.6-8 horst_0.1 dplyr_1.0.6 haven_2.4.1 psych_2.1.6
loaded via a namespace (and not attached):
[1] nlme_3.1-152 fs_1.5.0 usethis_2.0.1 devtools_2.4.2 insight_0.14.2
[6] RColorBrewer_1.1-2 rprojroot_2.0.2 tools_4.1.0 backports_1.2.1 utf8_1.2.1
[11] R6_2.5.0 sjlabelled_1.1.8 rpart_4.1-15 DBI_1.1.1 colorspace_2.0-1
[16] nnet_7.3-16 withr_2.4.2 gridExtra_2.3 tidyselect_1.1.1 prettyunits_1.1.1
[21] mnormt_2.0.2 processx_3.5.2 emmeans_1.6.1 compiler_4.1.0 performance_0.7.2
[26] cli_2.5.0 htmlTable_2.2.1 desc_1.3.0 bayestestR_0.10.0 checkmate_2.0.0
[31] scales_1.1.1 mvtnorm_1.1-2 readr_1.4.0 callr_3.7.0 stringr_1.4.0
[36] digest_0.6.27 pbivnorm_0.6.0 foreign_0.8-81 minqa_1.2.4 htmltools_0.5.1.1
[41] jpeg_0.1-8.1 base64enc_0.1-3 pkgconfig_2.0.3 lme4_1.1-27 sessioninfo_1.1.1
[46] fastmap_1.1.0 htmlwidgets_1.5.3 rlang_0.4.11 rstudioapi_0.13 generics_0.1.0
[51] magrittr_2.0.1 parameters_0.14.0 Matrix_1.3-3 Rcpp_1.0.6 munsell_0.5.0
[56] fansi_0.4.2 prediction_0.3.14 lifecycle_1.0.0 stringi_1.6.1 MASS_7.3-54
[61] pkgbuild_1.2.0 grid_4.1.0 parallel_4.1.0 sjmisc_2.8.7 forcats_0.5.1
[66] crayon_1.4.1 splines_4.1.0 sjstats_0.18.1 hms_1.1.0 tmvnsim_1.0-2
[71] knitr_1.33 ps_1.6.0 pillar_1.6.1 boot_1.3-28 estimability_1.3
[76] effectsize_0.4.5 stats4_4.1.0 pkgload_1.2.1 glue_1.4.2 latticeExtra_0.6-29
[81] data.table_1.14.0 remotes_2.4.0 modelr_0.1.8 vctrs_0.3.8 png_0.1-7
[86] nloptr_1.2.2.2 testthat_3.0.3 gtable_0.3.0 purrr_0.3.4 tidyr_1.1.3
[91] assertthat_0.2.1 cachem_1.0.5 xfun_0.23 xtable_1.8-4 broom_0.7.6
[96] tibble_3.1.1 tinytex_0.31 memoise_2.0.0 cluster_2.1.2 ellipsis_0.3.2
> mariebk commented
Solved, age was dbl+lbl. It works when I transform age to numeric!