leylabmpi/Struo2

Cannot install the conda environment

Valentin-Bio-zz opened this issue · 1 comments

Valentin-Bio-zz commented

Hello I'm trying to install Struo2 ,

First I downloaded the repo with git clone:

git clone https://github.com/leylabmpi/Struo2.git

I cd into the downloaded Struo2/ folder

Then when I try to install the conda environment with the suggested code:

conda env create --name struo2 conda_env.yaml

I got the following error message:

SpecNotFound: Invalid name, try the format: user/package

So I tried the following:

conda env create --name struo2 leylabmpi/Struo2.git

getting the following report:

"> >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<

Traceback (most recent call last):
  File "/data/vberrios/miniconda3/lib/python3.8/site-packages/conda/exceptions.py", line 1080, in __call__
    return func(*args, **kwargs)
  File "/data/vberrios/miniconda3/lib/python3.8/site-packages/conda_env/cli/main.py", line 80, in do_call
    exit_code = getattr(module, func_name)(args, parser)
  File "/data/vberrios/miniconda3/lib/python3.8/site-packages/conda_env/cli/main_create.py", line 88, in execute
    spec = specs.detect(name=name, filename=get_filename(args.file), directory=os.getcwd())
  File "/data/vberrios/miniconda3/lib/python3.8/site-packages/conda_env/specs/__init__.py", line 43, in detect
    if spec.can_handle():
  File "/data/vberrios/miniconda3/lib/python3.8/site-packages/conda_env/specs/binstar.py", line 38, in can_handle
    result = self._can_handle()
  File "/data/vberrios/miniconda3/lib/python3.8/site-packages/conda_env/specs/binstar.py", line 53, in _can_handle
    return self.package is not None and self.valid_package()
  File "/data/vberrios/miniconda3/lib/python3.8/site-packages/conda_env/specs/binstar.py", line 117, in package
    self._package = self.binstar.package(self.username, self.packagename)
  File "/data/vberrios/miniconda3/lib/python3.8/site-packages/binstar_client/__init__.py", line 299, in package
    self._check_response(res)
  File "/data/vberrios/miniconda3/lib/python3.8/site-packages/binstar_client/__init__.py", line 227, in _check_response
    raise ErrCls(msg, res.status_code)
binstar_client.errors.BinstarError: ('Forbidden: Request forbidden -- authorization will not help ([GET] https://api.anaconda.org/package/leylabmpi/Struo2.git -> 403)', 403)

So how can I install the program?

nick-youngblut commented

It appears that you forgot to use the --file parameter:

conda env create --name struo2 --file conda_env.yaml

You can speed up the process with mamba

  • ❤️1