GTDB207 genes_db.tar.gz missing
SmalJonni opened this issue · 2 comments
SmalJonni commented
Hi Nick,
Thank you for your work on Struo2.
I was looking on the ftp site under /ebio/projects/struo2/GTDB_release207/genes to download the genes_db.tar.gz to update the provided humann3 GTDB207 databases with my own MAGs. However, the file does not seem to exist.
Can I substitute the file with /ebio/projects/struo2/GTDB_release202/genes/genes_db.tar.gz or is there any recommended way to avoid recomputation from scratch?
Regards
nick-youngblut commented
Thanks @SmalJonni for spotting the missing file! I've started the upload job. The file is ~45 Gb, so the upload probably won't be finished until tomorrow
SmalJonni commented
Thank you for solving the issue!