Error in running fermikit
Addicted-to-coding opened this issue · 0 comments
Addicted-to-coding commented
When I try to run the software using:
fermi.kit/run-calling -t16 ~/reference.genome/chr19_new.fa prefix.mag.gz | sh, I get the error
ERROR: failed to locate the BWA index. Please run 'fermi.kit/bwa index -p ~/reference.genome/chr19_new.fa ref.fa'.
When I run this command on my .fa file, I get the error
[user@login2 test_fermikit]$ fermi.kit/bwa index -p ~/reference.genome/chr19_new.fa a.fa
[bwa_index] Pack FASTA... [bns_fasta2bntseq] Failed to allocate 0 bytes at bntseq.c line 303: Success