lhatsk/AlphaLink

Issues

• inference without MSA

  #25 opened 3 months ago by sehooni
  7

• integration of AlphaLink into AlphaFold3

  #24 opened 4 months ago by Suparat-Scheu
  1

• hands-on protocol for contacts_to_distograms

  #9 opened 2 years ago by Yan-Yan-2020
  34

• Problem with Crosslinking data input

  #18 opened a year ago by Li-dacheng
  12

• Alphalink install failed

  #22 opened a year ago by jIskCoder
  3

• Installation unclear

  #23 opened 9 months ago by james-vincent
  1

• Running "predict_with_crosslinks.py" with "restraints.csv --distograms" gives the error

  #21 opened 10 months ago by BelyaevaJuly
  6

• Run "python preprocessing_distributions.py --infile restraints.csv" but get an error

  #20 opened 10 months ago by chenx469
  4

• No MSA output - precomputed alignments called automatically

  #15 opened a year ago by ciancone94
  3

• CUDA stub file missing for cpu-only build

  #14 opened a year ago by jgoodson
  1

• Inter-subunit crosslinking data

  #19 opened a year ago by Samuel-gwb
  2

• Request for training

  #17 opened a year ago by sehooni
  5

• Request for an example folder

  #16 opened a year ago by wtq18
  1

• Issue with multimer

  #6 opened a year ago by samuelmurail
  3

• problem with model loading

  #13 opened a year ago by SimpleNumber
  12

• Save pkl files

  #7 opened a year ago by jurut
  1

• Wrong array shape when using single crosslink record

  #12 opened a year ago by georgkempf
  1

• Over-weight of crosslinking data

  #11 opened 2 years ago by Yan-Yan-2020
  4

• FDR Description in Arg parse is potentially wrong

  #4 opened 2 years ago by smturzo
  3

• crosslinks need to be provided as comma separated, not space

  #3 opened 2 years ago by gieses
  1