Pinned Repositories
fold_tree
snakemake pipeline for creating trees from sequence sets
bioinformatics_shed
crassify
Pipeline to taxonomically classify viral metagenome data.
crassify_tree
flexible-jekyll
Flexible-Jekyll is a simple and clean theme for Jekyll
linda5mith.github.io
:triangular_ruler: Jekyll theme for building a personal site, blog, project documentation, or portfolio.
microsnp
A bcftools pipeline to find SNPs for known microbial species in a metagenomic dataset.
PhageBoost
Rapid discovery of novel prophages using biological feature engineering and machine learning
shapes
Workship material for Introduction to Software Thinking
foldseek
Foldseek enables fast and sensitive comparisons of large structure sets.
linda5mith's Repositories
linda5mith/bioinformatics_shed
linda5mith/crassify
Pipeline to taxonomically classify viral metagenome data.
linda5mith/crassify_tree
linda5mith/flexible-jekyll
Flexible-Jekyll is a simple and clean theme for Jekyll
linda5mith/linda5mith.github.io
:triangular_ruler: Jekyll theme for building a personal site, blog, project documentation, or portfolio.
linda5mith/microsnp
A bcftools pipeline to find SNPs for known microbial species in a metagenomic dataset.
linda5mith/PhageBoost
Rapid discovery of novel prophages using biological feature engineering and machine learning
linda5mith/shapes
Workship material for Introduction to Software Thinking