luuleitner/deepMTJ

Initialization

lauwel opened this issue · 1 comments

Hi Cristoph! Thanks for sharing your awesome project.

I'm struggling to set up deepMTJ on my computer. In the README, there's a line that says "Create the deepMTJ virtual environment in your Anaconda terminal and install all necessary libraries (listed in the requirements.txt file) [...]". When I cloned the repository, I couldn't find the "requirements.txt" file, so I ran into an error when I ran the code through Anaconda in the deepMTJ directory (i.e. CondaFileIOError: 'requirements.txt'. [Errno 2] No such file or directory: 'requirements.txt'"). Did I miss it somewhere?

I then went to Colab and ran the sample code which worked great. I only had a problem when I went to upload my own video (which is an uncompressed AVI created in MATLAB as I'm not using a clinical-grade ultrasound machine). I tried to match the file parameters to the esaote_video.avi sample video, but it seems I may have missed something. I'm happy to share my video if that would be helpful (though I can't share it here as AVI is unsupported by Github).

Any suggestions you have on either issue would be helpful. Thanks again for sharing!

Lauren

Dear Lauren,
thank you very much for your feedback. Indeed, the requirments.txt was missing! I uploaded the file to the repo. Let me know if you experience any further issues with your installation!

As for your video and online prediction, I can take a look (please send me a sample video to my email christoph.leitner@tugraz.at).

With kind regards
Christoph