Libmamba failed to parse PackageInfo URL error (regression)
Closed this issue · 1 comments
bnelsj commented
Troubleshooting docs
- My problem is not solved in the Troubleshooting docs
Anaconda default channels
- I do NOT use the Anaconda default channels (pkgs/* etc.)
How did you install Mamba?
Micromamba
Search tried in issue tracker
Packageinfo url
Latest version of Mamba
- My problem is not solved with the latest version
Tried in Conda?
Not applicable
Describe your issue
I'm trying to build a micromamba environment from a lock file with docker. The environment requires a pip package. Building the container succeeds with mambaorg/micromamba:1.5.10 but fails with 2.0 and newer versions.
The error:
> [5/5] RUN micromamba install -y -n base -f ./conda-lock.yml && micromamba clean --all --yes:
0.190 critical libmamba Fail to parse PackageInfo URL "https://files.pythonhosted.org/packages/e4/2f/b6ad927d467451a1b5872cce8e7204ec25d2a6cde8077cb28003ed35787d/Checkm-0.4.tar.gz"
The env the lock was created from:
channels:
- conda-forge
- bioconda
- nodefaults
dependencies:
- pip
- pip:
- checkm
The Dockerfile:
FROM mambaorg/micromamba:2.0.3
WORKDIR /opt/app
USER root
RUN chown -R mambauser:mambauser /opt/app
COPY conda-lock.yml .
RUN micromamba install -y -n base -f ./conda-lock.yml && \
micromamba clean --all --yes
ENTRYPOINT ["/usr/local/bin/_entrypoint.sh"]
The command to generate the lock file from the env:
conda-lock lock -f env.yml -k lock -p linux-64
The conda-lock file is attached (renamed to fit file upload rules).
conda-lock.yml.txt
mamba info / micromamba info
No response
Logs
No response
environment.yml
No response
~/.condarc
No response