marbl/CHM13

pseudohomologous regions

ekg opened this issue · 4 comments

ekg commented

Would it be helpful to add the PHRs as annotation objects? We can share. CC @AndreaGuarracino

I attach them here: SupplementaryFile5.chrACRO_7-Dec-22_PHRs.bed.gz

Supplementary File 5. Pseudo-homologous regions identified in the acrocentric chromosomes of T2T-CHM13. The first three columns represent the T2T-CHM13 chromosome, the starting position, and the ending position of each pseudo-homologous region. Column 4 is the average Shannon Diversity Index. Column 5 is the average number of contigs.