I don't understand how to get the right K mer size
Closed this issue · 2 comments
Axze-rgb commented
Hello, I know it seems obvious and easy, but if I use your example with the human genome:
best_k.sh 6.2GB 0.001
genome: 6.2GB
tolerable collision rate: 0.001
6.2983
It's not 21
What am I missing?
Thanks a lot
arangrhie commented
My best_k.sh isn't smart to parse out the .
and GB
. Please use 6200000000
for 6.2 GB.
Axze-rgb commented
Ahhh, thank you :)