martinholub

Engineer who can train neural network, culture cells, analyse big omics data and automate your wet lab. Bilingual in DNA and Python.

ETHZZürich

Pinned Repositories

awesome-biosecurity-datasets
Awesome Public Biosecurity Datasets & Resources
2 2 00
demos-blogs-examples
Repository with code for demos, examples and blog posts
Language:Jupyter Notebook2 2 01
DroNc-seq
Workflow for data analysis of DroNc-seq Data
Language:HTML2 2 20
HackZurich2017
Demo of browser extension that flags atypical news articles based on their fringiness
Language:HTML0 3 00
mkzh-charioteer
Smart micro-delivery project @MakeZurich
Language:C++0 3 00
ML-MRI_BrainScanAnalysis
Machine Learning code to extract information from 3D MRI brain scans
Language:Python3 2 00
motrack
Mouse motion tracking
Language:Python0 2 00
openFDA-DeviceEvent
Exploration of openFDA adverse events database for medical devices
Language:Jupyter Notebook0 2 01
postprocessorREGENHU
Postprocessing script for Slic3r and REGENHU Biofactory bioprinter
Language:Python1 2 00
stochastic-processes-kyotoUx009x
Solutions and extensions to "KyotoUx-009x: Stochastic Processes: Data Analysis and Computer Simulation"
Language:Jupyter Notebook5 3 04

martinholub's Repositories

martinholub/stochastic-processes-kyotoUx009x
Solutions and extensions to "KyotoUx-009x: Stochastic Processes: Data Analysis and Computer Simulation"
Language:Jupyter Notebook5 3 04
martinholub/awesome-biosecurity-datasets
Awesome Public Biosecurity Datasets & Resources
2 2 00
martinholub/demos-blogs-examples
Repository with code for demos, examples and blog posts
Language:Jupyter Notebook2 2 01
martinholub/DroNc-seq
Workflow for data analysis of DroNc-seq Data
Language:HTML2 2 20
martinholub/sta426
Statistical Analysis of High-Throughput Genomic and Transcriptomic Data (UZH) 2017
Language:HTML2 2 10
martinholub/martinholub.github.io
Personal Web
Language:HTML1 2 0
martinholub/postprocessorREGENHU
Postprocessing script for Slic3r and REGENHU Biofactory bioprinter
Language:Python1 2 00
martinholub/HackZurich2017
Demo of browser extension that flags atypical news articles based on their fringiness
Language:HTML0 3 00
martinholub/mkzh-charioteer
Smart micro-delivery project @MakeZurich
Language:C++0 3 00
martinholub/motrack
Mouse motion tracking
Language:Python0 2 00
martinholub/allen-brain-atlas
Exploratory code of data exposed by Allen SDK
Language:Jupyter Notebook2 0
martinholub/AnnotationForge
Code for Building Annotation Database Packages
Language:R1 0
martinholub/BatchEffectRemoval
Minimal Example of Batch Effect Removal Using Distribution Matching NN
Language:Jupyter Notebook
martinholub/bioconda-recipes
Conda recipes for the bioconda channel.
Language:Shell2 0
martinholub/deconvolve-step
Deconvolution from step function
Language:Python
martinholub/dropSeqPipe
A drop-seq pipeline built on snakemake
Language:R2 0
martinholub/Flavor-Network
Language:Jupyter Notebook2 0
martinholub/gillespie-notebook
Theory and examples for SSA and Gillespie's Method
Language:Jupyter Notebook1
martinholub/hugo-site
Language:Jupyter Notebook2 0
martinholub/jekyll_site
full jekyll blog
Language:Jupyter Notebook
martinholub/keras-rl
Deep Reinforcement Learning for Keras.
Language:Python2 0
martinholub/material
Links to materials for STA 426 Fall Semester 2017
Language:HTML2 0
martinholub/MLFoodPairing
Food pairing using Machine Learning
Language:Jupyter Notebook2 0
martinholub/PolymerCpp
2D and 3D wormlike chain generator for Python and written in C++
Language:C++1 0
martinholub/reconfigurable_organisms
Language:C++1 0
martinholub/scRNA.seq.course
Analysis of single cell RNA-seq data course, Cambridge University, UK
Language:TeX2 0
martinholub/sparse-deconv-py
Official Python implementation of the 'Sparse deconvolution'-v0.3.0
Language:Python1 0
martinholub/swtch
swtch.com web server
Language:Go1 0
martinholub/tensorboard-demo
Tensorboard Demo with MNIST Data
Language:Python2 0
martinholub/Zotero-Dark-Theme
userChrome.css file for a Zotero dark theme. Suggestions for improvements are welcome.
Language:CSS1 0