maxwshen

Machine learning research for science. Forbes 30 under 30 Science.

Genentech

Pinned Repositories

be_predict_bystander
Deep conditional autoregressive models for genome editing sequence-to-sequence problems
Language:Python10 4 16
be_predict_efficiency
Language:Python6 2 17
gflownet
Language:Python14 3 00
hackerargs
Configurable options in 1 line of code
Language:Python4 1 10
iap-appbml
Applied Probabilistic Programming & Bayesian Machine Learning (MIT IAP 2017)
Language:Python33 6 58
iap-cidl
Causal Inference & Deep Learning, MIT IAP 2018
85 15 225
inDelphi-app
Heroku/Dash app for inDelphi.
Language:Python11 3 04
indelphi-dataprocessinganalysis
Data Processing, Modeling and Analysis scripts for CRISPR-inDelphi
Language:Python13 5 112
inDelphi-model
Predictive model for CRISPR-mediated DNA repair outcomes through NHEJ/MMEJ, built with machine learning
Language:Python25 3 111
piu-analysis
Platform for pump it up data analysis
Language:Jupyter Notebook19 4 01

maxwshen's Repositories

maxwshen/piu-analysis
Platform for pump it up data analysis
Language:Jupyter Notebook19 4 01
maxwshen/gflownet
Language:Python14 3 00
maxwshen/indelphi-dataprocessinganalysis
Data Processing, Modeling and Analysis scripts for CRISPR-inDelphi
Language:Python13 5 112
maxwshen/inDelphi-app
Heroku/Dash app for inDelphi.
Language:Python11 3 04
maxwshen/be_predict_bystander
Deep conditional autoregressive models for genome editing sequence-to-sequence problems
Language:Python10 4 16
maxwshen/be_predict_efficiency
Language:Python6 2 17
maxwshen/evoracle
A method for reconstructing frequency trajectories and fitnesses of long genotypes from short read data from directed evolution timepoints.
Language:Python6 4 11
maxwshen/hackerargs
Configurable options in 1 line of code
Language:Python4 1 10
maxwshen/piu-app
Language:JavaScript3 3 01
maxwshen/baseedit-app
Heroku web app with Dash Plotly
Language:Python2 3 0
maxwshen/be-modeling
Code used for training BE-Hive models
Language:Python2 3 1
maxwshen/lib-analysis
Language:Python2 3 12
maxwshen/evoracle-dataprocessinganalysis
Language:Jupyter Notebook1 2 01
maxwshen/latent-multiGP-inference
Joint inference of 10 latent Gaussian processes on time series data with latent stochastic weekend/holiday/Covid effectsGPyTorch and Pyro
Language:Python1 3 00
maxwshen/mylib
A collection of generically useful scripts and functions
Language:Python1 3 0
maxwshen/argmaxblog
Language:HTML2 0
maxwshen/explore-implicit-sgd
Language:Python4 0
maxwshen/lib-dataprocessing
Language:Python3 22
maxwshen/mera_tiling
Tiling Assay for MERA
Language:Python3 0
maxwshen/pamvar-processing
Language:Python3 11
maxwshen/peptide-screen-dataprocessing
Language:Python2 0
maxwshen/personal-website
Language:HTML3 0
maxwshen/piu-annotate
Language:Python1 0
maxwshen/piu-vis
Language:Python1 0
maxwshen/piu-vis-ss
Language:TypeScript1 0
maxwshen/prime-peptide
Data processing and analysis for a prime peptide library
Language:Python3 0
maxwshen/slippi-ai
Imitation learning from slippi replays.
Language:Python2 0
maxwshen/template
default project template
Language:Python3 0
maxwshen/Transformer-Puzzles
Puzzles for exploring transformers
Language:Jupyter Notebook1 0
maxwshen/zksync-web-v2-docs
zkSync v2.0 Documentation
Language:JavaScript1 0