mghotbi

mghotbi's Stars

• joey711/phyloseq

  phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:

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• merenlab/anvio

  An analysis and visualization platform for 'omics data

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• shahradelahi/next-extra

  ⚡ Enhance Next.js Beyond Limits

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• george0st/qgate-model

  ML/AI meta-model, used in MLRun/Iguazio/Nuclio, see qgate-sln-<MLRun | solution>

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• wireadmin/wireadmin

  🐉 WireGuard VPN Server with an web-based admin UI + TOR

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• shahradelahi/node-vault

  🔐 Modern client for the HashiCorp's Vault API

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• Kwynto/gosession

  This is quick session for net/http in golang. This package is perhaps the best implementation of the session mechanism, at least it tries to become one.

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• wwood/kingfisher-download

  Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.

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• cafferychen777/ggpicrust2

  Make Picrust2 Output Analysis and Visualization Easier

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• YuLab-SMU/treeio

  :seedling: Base Classes and Functions for Phylogenetic Tree Input and Output

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• sadrax4/nestjs-Unit_Test

  Controller & Repository Unit Test

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• Kalan-Lab/zol

  zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters (i.e. BGCs, phages, etc.)

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• sadrax4/Nodejs-store

  (Expressjs , Mongodb, graph ql , ResfulApi, Redis,socket.io )

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• knightlab-analyses/multiomic-cooccurrences

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• metagenome-atlas/Tutorial

  A tutorial for Metagenome-Atlas

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• jjberg2/PolygenicAdaptationCode

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• cgrundman/STM32-Tutorial

  Collection for simple projects to learn more about the STM32.

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• mghotbi/DspikeIn

  The importance of converting relative to absolute abundance in the context of microbial ecology: Introducing the user-friendly DspikeIn R package

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• fitzLab-AL/geneticOffsetR

  Custom R functions from: Fitzpatrick MC, Chhatre VE, Soolanayakanahally RY, Keller SR (in review) Experimental support for genomic prediction of climate maladaptation using the machine learning approach Gradient Forests.

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• lotteanna/Bioinformatics

  Scripts for transforming GBS data to analyses

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• memoll/MicrobiomeBioinformaticsAnalysisWorkshop2023

  Oswaldo Cruz Foundation - Rio de Janeiro, Brazil (April 2023)

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• mghotbi/Rhizosphere-Nitrogen-Fate

  Processed data and R codes Relevant to Management and rhizosphere microbial associations modulate genetic-driven nitrogen fate

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• sirusb/R3CPET

  3CPET: Finding Co-factor Complexes in Chia-PET experiment using a Hierarchical Dirichlet Process

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• eead-csic-compbio/barley-agroclimatic-association

  Association with high-resolution climate data reveals selection footprints in genomes of barley landraces across the Iberian peninsula

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• Khushi9354/Real-Time-Object-Recognition-Using-Pre-Trained-Model

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• memoll/acadie_16s

  Analysis of the phyllosphere and soil bacterial communities (16S amplicon sequencing)

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• mitramenon/Hybrid-zone-mov

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• RuhollahTaghizadeh/Workshop_SpatialDataAnalysisR

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• herptilemicrobiomes/MAG_combined

  Combined MAG profiling

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• kkajihara/waimea_stability

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