Xclim package not loading

Question

Xclim package not loading

kushankb opened this issue 2 years ago · 8 comments

Hi there,
I am a recent planetary computer convert. Till last week, I was able to load the xclim package on the hub with no issue. Today, when I am trying to load the xclim package, I get the following error: ModuleNotFoundError: No module named 'pint.unit'. It looks like there is an issue with the pint package dependency. Is there any fix?

Thanks!

Answer 1 · 2023-05-04T17:27:12.000Z

Thanks, I'm working on that currently.

tl/dr, we're running into Ouranosinc/xclim#1216. I'm going to fix it temporarily by pinning our version of pint to 0.19.2, and will look into moving to a newer version of xclim later (for some reason the environment isn't solving with the latest version).

I'll have a PR to https://github.com/microsoft/planetary-computer-containers shortly, and it'll be deployed later today.

You can work around it temporarily by pip install pint==0.19.2 and restarting your Python kernel.

Answer 2 · 2023-05-04T17:29:59.000Z

I faced the same issue on my local machine as well. I guess a lot more people will be facing a similar issue. Thanks for the quick response! Appreciate it. On May 4, 2023, at 10:27 AM, Tom Augspurger ***@***.******@***.***>> wrote: Thanks, I'm working on that currently. tl/dr, we're running into Ouranosinc/xclim#1216<Ouranosinc/xclim#1216>. I'm going to fix it temporarily by pinning our version of pint to 0.19.2, and will look into moving to a newer version of xclim later (for some reason the environment isn't solving with the latest version). I'll have a PR to https://github.com/microsoft/planetary-computer-containers shortly, and it'll be deployed later today. You can work around it temporarily by pip install pint==0.19.2 and restarting your Python kernel. — Reply to this email directly, view it on GitHub<#212 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AMRL23MIQ4XDYIRFGMRQ57LXEPRHXANCNFSM6AAAAAAXWCM5AA>. You are receiving this because you authored the thread.Message ID: ***@***.***>

Answer 3 · 2023-05-04T17:49:54.000Z

Installing pint ==0.19.2 does not completely resolve the issue. I am able to load the xclim package but, its creating additional errors while trying to run some of the xclim indices (eg. frost_days = xclim.indicators.atmos.frost_days(ds.tasmin, thresh ='0 degC', freq = "YS") ). On May 4, 2023, at 10:29 AM, kushank bajaj ***@***.******@***.***>> wrote: I faced the same issue on my local machine as well. I guess a lot more people will be facing a similar issue. Thanks for the quick response! Appreciate it. On May 4, 2023, at 10:27 AM, Tom Augspurger ***@***.******@***.***>> wrote: Thanks, I'm working on that currently. tl/dr, we're running into Ouranosinc/xclim#1216<Ouranosinc/xclim#1216>. I'm going to fix it temporarily by pinning our version of pint to 0.19.2, and will look into moving to a newer version of xclim later (for some reason the environment isn't solving with the latest version). I'll have a PR to https://github.com/microsoft/planetary-computer-containers shortly, and it'll be deployed later today. You can work around it temporarily by pip install pint==0.19.2 and restarting your Python kernel. — Reply to this email directly, view it on GitHub<#212 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AMRL23MIQ4XDYIRFGMRQ57LXEPRHXANCNFSM6AAAAAAXWCM5AA>. You are receiving this because you authored the thread.Message ID: ***@***.***>

Answer 4 · 2023-05-04T18:30:51.000Z

Hmm that's unfortunate. Looks like an incompatibility with pandas 2.x and the older version of xclim. I'll have to try getting everything updated.

Answer 5 · 2023-05-05T11:44:02.000Z

Right now it looks like we're stuck with what we have. The hard pin on pandas<2 by xclim 0.42 is incompatible with other things in our environment.

I believe I did get a basic example working with xclim 0.42, so if you're still seeing errors you might want to make a reproducible bug report and submit it to the issue tracker.

We'll upgrade the containers once xclim makes their next release.

Answer 6 · 2023-05-05T15:06:03.000Z

Thanks for your help, Tom! Installing xclim 0.42 seem to be working on a basic example for me too. Hope nothing changes. I’ll submit a reproducible bug report, if anything changes. On May 5, 2023, at 4:44 AM, Tom Augspurger ***@***.******@***.***>> wrote: Right now it looks like we're stuck with what we have. The hard pin on pandas<2 by xclim 0.42 is incompatible with other things in our environment. I believe I did get a basic example working with xclim 0.42, so if you're still seeing errors you might want to make a reproducible bug report and submit it to the issue tracker. We'll upgrade the containers once xclim makes their next release. — Reply to this email directly, view it on GitHub<#212 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AMRL23JTJJ3E6KG5CP4XGLLXETRYZANCNFSM6AAAAAAXWCM5AA>. You are receiving this because you authored the thread.Message ID: ***@***.***>

Answer 7 · 2023-06-19T11:59:13.000Z

I tried to update this last week, but ran into an issue with conda-lock. I'll try again this week.

Answer 8 · 2023-07-25T20:55:29.000Z

This is all fixed now. Closing.