mmagnus

mmagnus's Stars

• fish-shell/fish-shell

  The user-friendly command line shell.

  Language:Rust26.3k2807.2k1.9k

• Homebrew/homebrew-cask

  🍻 A CLI workflow for the administration of macOS applications distributed as binaries

  Language:Ruby21k3176.5k10.7k

• gruns/icecream

  🍦 Never use print() to debug again.

  Language:Python9.2k50135186

• bcpierce00/unison

  Unison file synchronizer

  Language:OCaml4.2k81571234

• mdtraj/mdtraj

  An open library for the analysis of molecular dynamics trajectories

  Language:Python598471k282

• petergardfjall/garminexport

  Garmin Connect activity exporter and backup tool

  Language:Python508416383

• achembarpu/pockyt

  Automate & manage your Pocket.com collection.

  Language:Python505111635

• pyranges/pyranges

  Performant Pythonic GenomicRanges

  Language:Python4431321947

• genome/bam-readcount

  Count bases in BAM/CRAM files

  Language:CMake305559495

• alhassy/ElispCheatSheet

  Quick reference to the core language of Emacs ---Editor MACroS.

  2266517

• Amber-MD/pytraj

  Python interface of cpptraj

  Language:Jupyter Notebook1721727838

• joaotavora/darkroom

  Simple distraction-free editing

  Language:Emacs Lisp14871012

• jaswindersingh2/SPOT-RNA

  RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.

  Language:Perl9662033

• aki237/zen-mode

  zen-mode : distraction free editing mode for emacs

  Language:Emacs Lisp66326

• hartleys/QoRTs

  Quality of RNA-Seq Toolset

  Language:Scala5269014

• KIT-MBS/pydca

  Direct coupling analysis software for protein and RNA sequences

  Language:Python463923

• dwhswenson/contact_map

  Contact map analysis for biomolecules; based on MDTraj

  Language:Python4242918

• hartleys/JunctionSeq

  The JunctionSeq R package is a powerful tool for testing and visualizing differential usage of exons and splice junctions in next-generation, high-throughput RNA-Seq experiments.

  Language:HTML2835615

• szymonzaczek/MDMS

  MDMS: Molecular Dynamics Made Simple; Python program facilitating performing Molecular Dynamics simulations of proteins

  Language:Python240010

• codekitchen/LifeMeter

  the most important progress bar of all

  Language:Swift22300

• jhgorrell/dna-mode-el

  dna-mode.el - an emacs mode for dna.

  Language:Emacs Lisp10215

• smaegol/nanotail

  R package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictions

  Language:R10345

• dlo9/calibre-recipes

  UNMAINTAINED - See README.md for an alternative

  Language:Python6412

• pzhaojohnson/RNA2Drawer

  5212

• tzok/mcq4structures

  A parent project for a set of subprojects related to Mean of Circular Quantities (MCQ).

  Language:Java4215

• GrzegorzLach/DesiRNA

  RNA sequence design software

  Language:Python2101

• maxewilkinson/Spliceosome-PyMOL-sessions

  PyMOL scripts and session files for published cryoEM structures of the spliceosome

  2201

• s-will/CARNA

  CARNA constraint-based alignment of RNAs

  Language:TeX2100

• sucongzhe/ENTRNA

  Language:Python1

• vreinharz/ProtRNADCA

  Language:Python1100