Beat by Beat: Classifying Cardiac Arrhythmias with Recurrent Neural Networks -- An entry for the PhysioNet / CinC challenge 2017 -- ========================== Mobile Health Systems Lab <www.mhsl.hest.ethz.ch> Contact: Patrick Schwab <patrick.schwab@hest.ethz.ch>, ETH Zurich Authors: See AUTHORS.txt License: GPLv3; See LICENSE.txt Description: Predicts the rhythm of given ECG signals using ensembles of deep recurrent models. INSTALL INSTRUCTIONS -------------------------- REQUIRES: - pip <https://pip.pypa.io/en/stable/> - Keras >= 1.2.2 - Theano >= 0.8.2 - matplotlib >= 1.3.1 - pandas >= 0.18.0 - h5py >= 2.6.0 - scikit-learn == 0.17.1 - pywavelets == 0.2.2 - imbalanced_learn == 0.2.1 - pyhsmm == 0.1.7 To train models you need to download the PhysioNet 2017 challenge data <physionet.org/challenge/2017/>. ATTENTION - PATCHES REQUIRED: To save bidirectional RNNs you need to additionally patch the version of Keras installed by pip using this patch: https://github.com/fchollet/keras/commit/b5dc734f4e08b997ae50c4e29a5c4b589595b188 To train HSMMs you need to patch the PyHSMM library in pyhsmm_states.py line 1071 to: obs, offset = obs[:,state], offset
mohcinemadkour/heart_rhythm_attentive_rnn
❤️📱 Heart rhythm classification from mobile event recorder data using attentive neural networks.
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