morris-lab/CellTagR
This repository contains the CellTag data analysis R package to support clone calling and lineage reconstruction.
R
Issues
- 0
- 2
error in Network construction
#24 opened by clumeng - 1
SRA data problem
#23 opened by AmoriLi - 0
- 7
Barcode extraction and clone counting
#21 opened by crist156 - 1
Error in JaccardAnalysis
#19 opened by elisafazz - 2
Best way to subset CellTag object
#20 opened by elisafazz - 7
Paired-end reads & multiple fastq files
#18 opened by deeKal - 2
- 1
whitelist error
#16 opened by khandaud15 - 14
- 19
- 1
- 1
Error in running ./starcode code line
#12 opened by bhrtrcn - 5
bam.test.obj <- CellTagMatrixCount(celltag.obj = bam.test.obj, barcodes.file = "./barcodes_all.tsv")
#11 opened by lk754673712 - 2
- 1
- 2
- 3
- 2
CellTagPostCollapsing returns collapsed.count with 1 row when reading in multiple BAM files
#6 opened by bc2zb - 7
- 13
Merging two CellTag objects?
#4 opened by RobertKSuter - 2
SingleCellDataBinatization error?
#3 opened by lb15 - 5
CellTagR support for Drop-seq BAM files
#2 opened by sarshanp - 1
allow .fq file extension
#1 opened by OwenRackham