mtnrn's Stars
MATLAB-Graphics-and-App-Building/spike-raster-plot
A spike raster plot from spike time stamps with optional trial and group data.
cortex-lab/spikes
cortex lab code for electrophysiology
piermorel/gramm
Gramm is a complete data visualization toolbox for Matlab. It provides an easy to use and high-level interface to produce publication-quality plots of complex data with varied statistical visualizations. Gramm is inspired by R's ggplot2 library.
peterzh/easy-plot-neural
Easy plotting for spiking raster/psths, and other event-aligned averages
anagamori/Motor-Unit-Model-Fuglevand
anagamori/MU-Population-Model-Nagamori-2020
MATLAB code for a motor unit population described in Nagamori et al. 2020
kenjihiranabe/The-Art-of-Linear-Algebra
Graphic notes on Gilbert Strang's "Linear Algebra for Everyone"
flatironinstitute/isosplit5
ISO-SPLIT clustering (stand-alone version)
pillowlab/BinaryPursuitSpikeSorting
Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)
njh27/spikesorting_fullpursuit
Neural spike sorting algorithm based on iso-cut clustering and template matching in raw voltage space for the detection of near-simultaneous spike events.
BigBrainProject-Tools/A3D-doc
Atelier3D wiki
lahammond/BrainJ
Fiji pipeline for automated serial section reconstruction and mouse brain analysis.
RILAB/statements
Successful Job Applications and Grants
christophe-pouzat/PouzatDetorakisEuroScipy2014
A reproducible document with an extended version of SPySort: Neuronal Spike Sorting with Python Proceedings of the 7th European Conference on Python in Science (EuroSciPy 2014), edited by Pierre de Buyl and Nelle Varoquaux, pp. 27–34.
spyking-circus/spyking-circus
Fast and scalable spike sorting in python
paninski-lab/yass
YASS: Yet Another Spike Sorter
flatironinstitute/mountainlab-js
MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting software, but is designed to be more generally applicable.
scratcharchive/mountainsort_examples
Examples of using MountainSort spike sorting software.
flatironinstitute/mountainsort
Spike sorting software
tridesclous/tridesclous
offline/online spike sorting. Un logiciel de gauche qui ne fait pas d'amalgame entre la classe et la coquetterie.
SpikeInterface/spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
open-ephys/open-ephys-matlab-tools
Matlab code for interacting with the Open Ephys GUI
wj2/ephys-bhv-merger
snel-repo/autolfads-tf2
A TensorFlow 2.0 implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.
YannLong17/MonkeyLogic
liyipeng-moon/PassiveViewing_in_ML
apply passive viewing paradigm in monkey logic
shayo/Planner
MR Guided Planning Software
ArnaultCAILLET/Caillet-et-al-2022-PLOS_Comput_Biol
Open-source code described in 'Estimation of the firing behaviour of a complete motoneuron pool by combining electromyography signal decomposition and realistic motoneuron modelling'
sunericd/dynamicviz
tstavropoulos/TestArduino
A C++ application to interface with an Arduino.