pip install napkinxc failed
adelany3 opened this issue · 1 comments
I've been trying to install napkinxc via pip and have repeatedly run into the below error. Any idea what could be wrong? Thanks.
(base) atl436user1:~ user.name$ pip install napkinxc
Collecting napkinxc
Using cached napkinxc-0.4.0.tar.gz (142 kB)
Installing build dependencies ... done
Getting requirements to build wheel ... done
Preparing wheel metadata ... done
Requirement already satisfied: sklearn in ./anaconda3/lib/python3.7/site-packages/sklearn-0.0-py3.7.egg (from napkinxc) (0.0)
Requirement already satisfied: scipy in ./anaconda3/lib/python3.7/site-packages (from napkinxc) (1.3.1)
Requirement already satisfied: numpy in ./anaconda3/lib/python3.7/site-packages (from napkinxc) (1.18.1)
Requirement already satisfied: scikit-learn in ./anaconda3/lib/python3.7/site-packages (from sklearn->napkinxc) (0.22.1)
Requirement already satisfied: joblib>=0.11 in ./anaconda3/lib/python3.7/site-packages (from scikit-learn->sklearn->napkinxc) (0.14.1)
Building wheels for collected packages: napkinxc
Building wheel for napkinxc (PEP 517) ... error
ERROR: Command errored out with exit status 1:
command: /Users/alec.delany/anaconda3/bin/python /Users/user.name/anaconda3/lib/python3.7/site-packages/pip/_vendor/pep517/_in_process.py build_wheel /var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/tmpogk81v8q
cwd: /private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-install-4bhkxsrq/napkinxc
Complete output (106 lines):
running bdist_wheel
running build
running build_py
-- downloading/updating pybind11
-- pybind11 directory found, pulling...
From https://github.com/pybind/pybind11
- branch master -> FETCH_HEAD
--
Already on 'master'
-- Your branch is up to date with 'origin/master'.
-- pybind11 v2.6.0
-- Configuring done
-- Generating done
-- Build files have been written to: /private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-install-4bhkxsrq/napkinxc/build
Scanning dependencies of target pynxc
[ 6%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/base.cpp.o
[ 9%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/args.cpp.o
[ 15%] Building C object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/blas/daxpy.c.o
[ 15%] Building C object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/blas/dnrm2.c.o
[ 15%] Building C object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/blas/ddot.c.o
[ 21%] Building C object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/blas/dscal.c.o
[ 21%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/data_reader.cpp.o
[ 31%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/data_readers/vw_reader.cpp.o
[ 31%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/data_readers/libsvm_reader.cpp.o
[ 31%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/liblinear/linear.cpp.o
[ 34%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/liblinear/tron.cpp.o
[ 37%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/log.cpp.o
[ 40%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/main.cpp.o
[ 43%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/measure.cpp.o
[ 46%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/misc.cpp.o
[ 50%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/model.cpp.o
[ 53%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/models/br.cpp.o
[ 56%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/models/extreme_text.cpp.o
[ 59%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/models/hsm.cpp.o
In file included from /private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-install-4bhkxsrq/napkinxc/src/model.cpp:36:
/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-install-4bhkxsrq/napkinxc/src/models/online_plt.h:46:10: error: 'shared_timed_mutex' is unavailable: introduced in macOS 10.12
std::shared_timed_mutex treeMtx;
^
/Library/Developer/CommandLineTools/usr/bin/../include/c++/v1/shared_mutex:205:58: note: 'shared_timed_mutex' has been explicitly marked unavailable here
class _LIBCPP_TYPE_VIS _LIBCPP_AVAILABILITY_SHARED_MUTEX shared_timed_mutex
^
[ 62%] Building CXX object python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir////src/models/kmeans.cpp.o
1 error generated.
make[2]: *** [python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir///__/src/model.cpp.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[1]: *** [python/napkinxc/_napkinxc/CMakeFiles/pynxc.dir/all] Error 2
make: *** [all] Error 2
[cmake] configuring CMake project...
running build_py (cmake)
[cmake] building CMake project -> build
Traceback (most recent call last):
File "/Users/user.name/anaconda3/lib/python3.7/site-packages/pip/_vendor/pep517/_in_process.py", line 280, in
main()
File "/Users/user.name/anaconda3/lib/python3.7/site-packages/pip/_vendor/pep517/_in_process.py", line 263, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
File "/Users/user.name/anaconda3/lib/python3.7/site-packages/pip/_vendor/pep517/_in_process.py", line 205, in build_wheel
metadata_directory)
File "/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-build-env-evty4816/overlay/lib/python3.7/site-packages/setuptools/build_meta.py", line 217, in build_wheel
wheel_directory, config_settings)
File "/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-build-env-evty4816/overlay/lib/python3.7/site-packages/setuptools/build_meta.py", line 202, in _build_with_temp_dir
self.run_setup()
File "/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-build-env-evty4816/overlay/lib/python3.7/site-packages/setuptools/build_meta.py", line 254, in run_setup
self).run_setup(setup_script=setup_script)
File "/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-build-env-evty4816/overlay/lib/python3.7/site-packages/setuptools/build_meta.py", line 145, in run_setup
exec(compile(code, file, 'exec'), locals())
File "setup.py", line 64, in
include_package_data=True,
File "/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-build-env-evty4816/overlay/lib/python3.7/site-packages/cmaketools/init.py", line 98, in setup
_setup(**setup_args)
File "/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-build-env-evty4816/overlay/lib/python3.7/site-packages/setuptools/init.py", line 153, in setup
return distutils.core.setup(**attrs)
File "/Users/user.name/anaconda3/lib/python3.7/distutils/core.py", line 148, in setup
dist.run_commands()
File "/Users/user.name/anaconda3/lib/python3.7/distutils/dist.py", line 966, in run_commands
self.run_command(cmd)
File "/Users/user.name/anaconda3/lib/python3.7/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-build-env-evty4816/overlay/lib/python3.7/site-packages/wheel/bdist_wheel.py", line 290, in run
self.run_command('build')
File "/Users/user.name/anaconda3/lib/python3.7/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/Users/user.name/anaconda3/lib/python3.7/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/Users/user.name/anaconda3/lib/python3.7/distutils/command/build.py", line 135, in run
self.run_command(cmd_name)
File "/Users/user.name/anaconda3/lib/python3.7/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/Users/user.name/anaconda3/lib/python3.7/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-build-env-evty4816/overlay/lib/python3.7/site-packages/cmaketools/cmakecommands.py", line 110, in run
self._run_cmake()
File "/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-build-env-evty4816/overlay/lib/python3.7/site-packages/cmaketools/cmakecommands.py", line 104, in _run_cmake
pkg_version=self.distribution.get_version(),
File "/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-build-env-evty4816/overlay/lib/python3.7/site-packages/cmaketools/cmakebuilder.py", line 349, in run
env=env,
File "/private/var/folders/p9/mx3qb0ms6_gf8jx7tq82xr14s6lmfx/T/pip-build-env-evty4816/overlay/lib/python3.7/site-packages/cmaketools/cmakeutil.py", line 169, in build
return sp.run(args, env=env).check_returncode()
File "/Users/user.name/anaconda3/lib/python3.7/subprocess.py", line 422, in check_returncode
self.stderr)
subprocess.CalledProcessError: Command '['cmake', '--build', 'build', '-j', '7', '--config', 'Release']' returned non-zero exit status 2.
ERROR: Failed building wheel for napkinxc
Failed to build napkinxc
ERROR: Could not build wheels for napkinxc which use PEP 517 and cannot be installed directly
Running python 3.7.1 on MacOS Catalina version 10.15.6.
I'm closing this old issue since now there are prebuilt wheels for all the platforms.