nextstrain/auspice

Issues

• Make bioconda aarch64 package available for auspice

  #1775 opened 6 months ago
  1

• Reset layout in entropy view has no effect when URL params are set: either disable button in that case, or make it override URL params

  #1774 opened 6 months ago
  0

• [tanglegrams] genotype is only computed for LHS tree

  #1773 opened 6 months ago
  0

• [tanglegrams] zooming in one tree breaks zooming in the other

  #1772 opened 7 months ago
  0

• [tanglegrams] Node info modal broken

  #1770 opened 6 months ago
  1

• Enabling more divergence scale options than just the two magic ones: time and divergence

  #1769 opened 7 months ago
  2

• Entropy panel: shift click to select multiple positions

  #1766 opened 8 months ago
  1

• measurements panel does not honor the value of `raw` in the `measurements_display` field of the measurements JSON

  #1758 opened 4 months ago
  0

• measurements panel crashes on load in Auspice when no threshold is provided during `augur measurements export`

  #1757 opened 4 months ago
  0

• `auspice view` not showing radial or rootless tree

  #1756 opened 9 months ago
  6

• [tanglegrams] Unable to view using Safari

  #1755 opened 6 months ago
  0

• Show mutation split into homoplasic/unique/reversions also on terminal branches, not just internal ones

  #1752 opened 9 months ago
  16

• Filter on continuous (numerical) attributes

  #1748 opened 10 months ago
  0

• Unexpected redux state mutations

  #1742 opened 10 months ago
  1

• [dev] hot-reloading broken

  #1737 opened 10 months ago
  2

• Add "nuc" branch label option parallel to "aa"

  #1736 opened a year ago
  5

• Genotype colouring doesn't work in tanglegram view

  #1735 opened 6 months ago
  1

• Tree: Allow customizing info panel entries

  #1729 opened a year ago
  2

• Narratives editor broken

  #1725 opened a year ago
  0

• Decide best practices for typing React props

  #1723 opened a year ago
  1

• Update `panelsAvailable` on change of `showTreeToo`

  #1722 opened a year ago
  0

• auspice view hangs

  #1720 opened a year ago
  5

• "Data updated" in byline sometimes renders lower than surrounding elements

  #1716 opened a year ago
  0

• Move "Date updated" to the top of the page

  #1713 opened a year ago
  0

• Migrate to modern Redux

  #1711 opened a year ago
  2

• Downstream PR preview creation and build slowness/timeouts

  #1709 opened a month ago
  10

• Filtering being deactivated after clicking away from metadata popup

  #1701 opened 10 months ago
  6

• ORF1ab is listed in JSON genome_annotations, but not in dropdown for Color by: Genotype

  #1699 opened a year ago
  4

• "Show all labels" should only show labels on visible/highlighted branches

  #1697 opened a year ago
  0

• Allow / infer types for dragged on metadata

  #1696 opened a year ago
  3

• SVG export with entropy panel is corrupted

  #1695 opened a year ago
  0

• v2.47.0 crashes when changing color for dataset that does not have entropy panel

  #1690 opened a year ago
  3

• Tree: change right padding based on tip label

  #1689 opened a year ago
  0

• [entropy panel] re-enable mousewheel zooming

  #1687 opened a year ago
  0

• [entropy panel] within CDS annotations

  #1686 opened a year ago
  0

• [entropy panel] improve performance

  #1685 opened a year ago
  0

• Allow JSON specification of divergence units

  #1683 opened a year ago
  0

• Inline root sequence

  #1682 opened a year ago
  0

• Allow showBranchLabels to be set via display_defaults

  #1676 opened a year ago
  0

• Remove (?) LFS from GitHub

  #1675 opened a year ago
  4

• Reduce prominence of deletions in branch hover tooltips

  #1666 opened 2 years ago
  0

• Remove git LFS

  #1658 opened a year ago
  0

• Add "how to build/run local version of Auspice CLI" to dev docs

  #1656 opened 2 years ago
  12

• BUG: Minima tips not highlighting when hovering over coloring legend

  #1654 opened a year ago
  1

• BUG: Scatter does not scale axis for negative continuous values - they are off the screen

  #1653 opened 2 years ago
  1

• Diversity panel extends beyond genome end on 3' end

  #1651 opened a year ago
  2

• ENH: Allow branches to be dotted/dashed in contrast to solid

  #1650 opened 2 years ago
  0

• Console reports dozens errors: `Error: <path> attribute d: Expected number, " M 5,NaN L 5,NaN".`

  #1647 opened a year ago
  7

• Unescaped quotes in downloaded TSV file

  #1648 opened 2 years ago
  5

• Legend bound creation does not consider observed values

  #1644 opened a year ago
  1