nextstrain/nextclade_data

Incorrect 'workflow' link to RSV dataset on nextclade.org

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Hi guys,

The RSV workflow link on nextclade.org does not exit. It should be:

https://github.com/nextstrain/nextclade_data/tree/master/data/nextstrain/rsv/a/EPI_ISL_412866

Also in the above link the readme link is similarly incorrect!

This is for both RSVA and RSVB.

image

Hi Ammar,

Thanks for the report! The idea was to provide a link not to the dataset files you linked, but to the source code of the Nextstrain workflow which produces these dataset files. This is useful for people who want to know how the dataset was produced, perhaps run the worflow themselves or even make their own customized version (e.g. to produce a custom dataset for a particular strain).

It's here actually: https://github.com/nextstrain/rsv

We'll discuss internally how to better organize this to prevent breakage in the future and will fix the links in the next version of the dataset.

Thanks, Ammar. I changed these links in the upstream repo to just point to the repo.

nextstrain/rsv@28e7f8e

With the next dataset release, these should fixed.

@ivan-aksamentov Oh! Apologies should have paid more attention. I agree the link to the workflow that generates the data is super useful.

Glad it was at least useful!