Sync to pggb a177033ddc3f73ff84d32b7ef24480f075dce3a4
subwaystation opened this issue · 1 comments
subwaystation commented
nf-core/pangenome feature request
Hi there!
Describe the solution you'd like
There have been some major updates in pggb
. I would like to reflect these in pangenome
.
- Update the Dockerfile to be based on a177033ddc3f73ff84d32b7ef24480f075dce3a4 version
pggb
. - As
edyeet
is now capable of aligning whole chromosomes very efficiently, use-N
as default: pangenome/pggb@db6e6fc. - Compare the input parameters of
pangenome
andpggb
and update accordingly.
subwaystation commented
Fixed via #29