[Feature] Add (bare-bones) validation/QC-package for OMERO

Question

[Feature] Add (bare-bones) validation/QC-package for OMERO

Opened this issue 9 months ago · 4 comments

The validation of OMERO-targeted ARCs might be more difficult due to OMERO's more complex requirements (compared to, say, Invenio or PRIDE) though we need to have some basic validation cases working.

Answer 1 · 2023-12-22T09:27:55.000Z

linking this poc python script from the biohackathon bielefeld that should offer a good start on how to map some properties: https://github.com/NFDI4BIOIMAGE/BHG2023-OMERO-ARC/blob/main/Task_Groups/06_ARC-2-OMERO/metadata_filler.py

Answer 2 · 2023-12-22T09:29:01.000Z

also note that i think these issues (for validation packages) might be better suited for https://github.com/nfdi4plants/arc-validate-packages

Answer 3 · 2023-12-22T12:16:12.000Z

Correct, transfer them. @kMutagene

Answer 4 · 2023-12-26T11:55:53.000Z

your wish is my command