ngocemy

ATACseq-Snakemake

Standard Parker Lab ATAC-seq processing pipeline in Snakemake form

CoursCancerSystemBiology

CoursEpigenomicsENS2020

CoursTranscriptomicsENS2020

TravailPratique

DAGWS

HBV_HCC_cancer

MCC_mouse

in collaboration with Alice Meunier

pareidolia

Multi-sample change detection in Hi-C patterns

polyidus

Polyidus provides a framework to catch chimeric DNA sequences with a tale of python

TP-meta3C

ngocemy/MCC_mouse

in collaboration with Alice Meunier

ngocemy/CoursCancerSystemBiology

ngocemy/CoursEpigenomicsENS2020

ngocemy/CoursTranscriptomicsENS2020

TravailPratique

ngocemy/DAGWS

ngocemy/HBV_HCC_cancer

ngocemy/pareidolia

Multi-sample change detection in Hi-C patterns

ngocemy/polyidus

Polyidus provides a framework to catch chimeric DNA sequences with a tale of python

ngocemy/TP-meta3C

ngocemy/ATACseq-Snakemake

Standard Parker Lab ATAC-seq processing pipeline in Snakemake form

ngocemy/chromosight

Detect chromatin loops (and other patterns) in Hi-C contact maps

ngocemy/CRCT

Internship for Bachelor thesis in Centre de Recherche en Cancerologie de Toulouse, France

ngocemy/gat

Genomic Association Tester

ngocemy/hicstuff

Simple library/pipeline to generate and handle simple Hi-C data

ngocemy/HiNT

HiC for copy Number variation and Translocation detection

ngocemy/keras

Deep Learning for humans

ngocemy/notebooks

code for deep learning courses

ngocemy/pyflow-ATACseq

ATAC-seq snakemake pipeline