ny-shao

bayes-net-r-hadoop

Bayesian Network with R and Hadoop

chip-seq_preprocess

A preprocessing pipeline for ChIP-seq, including alignment, quality control, and visualization.

cloudbiolinux

CloudBioLinux: configure virtual (or real) machines with tools for biological analyses

complete-seq

A flexible and dynamic RNA-seq pipeline

IDEA

Interactive Differential Expression Analyzer

ngsplot_related

ngs.plot is a useful visualization utility in the analysis of NGS data. Here are some scripts useful for the application of ngs.plot in the daily analysis.

ny-shao.utilities

Utilities for myself

pipelines_for_ChIP-seq_analysis

Pipelines for ChIP-seq analysis, such as peak calling, differential enrichment detection, and pausing index calculation for PolII.

ny-shao/chip-seq_preprocess

A preprocessing pipeline for ChIP-seq, including alignment, quality control, and visualization.

ny-shao/ny-shao.utilities

Utilities for myself

ny-shao/ngsplot_related

ngs.plot is a useful visualization utility in the analysis of NGS data. Here are some scripts useful for the application of ngs.plot in the daily analysis.

ny-shao/IDEA

Interactive Differential Expression Analyzer

ny-shao/pipelines_for_ChIP-seq_analysis

Pipelines for ChIP-seq analysis, such as peak calling, differential enrichment detection, and pausing index calculation for PolII.

ny-shao/bayes-net-r-hadoop

Bayesian Network with R and Hadoop

ny-shao/cloudbiolinux

CloudBioLinux: configure virtual (or real) machines with tools for biological analyses

ny-shao/complete-seq

A flexible and dynamic RNA-seq pipeline

ny-shao/learnyouahaskell-zh-tw.github.com

Chinese translation of Learn you a Haskell for great good

ny-shao/miRNA_pipeline_for_miRanalyzer

A pipeline of miRNA by using miRanalyzer

ny-shao/NewEBuy-master

suning_ebuy

ny-shao/ny-shao.github.io

ny-shao/region_analysis

A python script used to annotate genomic intervals.

ny-shao/RNAEditor